RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 IDH3AP50213 366 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 P2RX1P51575 399 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 SUMO3P55854 103 aaPredicted RBP20.36■□□□□ 0.85
PABPN1-207ENST00000556821 LRRC74AQ0VAA2 488 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 SNTB1Q13884 538 aaKnown RBP20.36■□□□□ 0.85
PABPN1-207ENST00000556821 CTU2Q2VPK5 515 aaKnown RBP20.36■□□□□ 0.85
PABPN1-207ENST00000556821 AP1ARQ63HQ0 302 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 FRRS1Q6ZNA5 592 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 ROPN1LQ96C74 230 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 SFXN3Q9BWM7 321 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 SAP130Q9H0E3 1048 aa20.36■□□□□ 0.85
PABPN1-207ENST00000556821 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 SERINC4A6NH21 518 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 H3BNH8 94 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 TNFSF13O75888 250 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 TGDSO95455 350 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 IL11P20809 199 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 UQCRC1P31930 480 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 MRPL19P49406 292 aaKnown RBP20.35■□□□□ 0.85
PABPN1-207ENST00000556821 EEFSECP57772 596 aaKnown RBP20.35■□□□□ 0.85
PABPN1-207ENST00000556821 TLE4Q04727 773 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 FOXF1Q12946 379 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 TOMM34Q15785 309 aaPredicted RBP20.35■□□□□ 0.85
PABPN1-207ENST00000556821 MAPK14Q16539 360 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 COX20Q5RI15 118 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 ATAD3BQ5T9A4 648 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 ZNF621Q6ZSS3 439 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 CHMP1BQ7LBR1 199 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 MIER2Q8N344 545 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 TRIML2Q8N7C3 387 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 FNDC9Q8TBE3 224 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 CKAP2Q8WWK9 683 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 RNASE6Q93091 150 aaKnown RBP20.35■□□□□ 0.85
PABPN1-207ENST00000556821 ADGRG7Q96K78 797 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 WDR45Q9Y484 360 aa20.35■□□□□ 0.85
PABPN1-207ENST00000556821 EEF1E1-BLOC1S5C9J1V9 151 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 RFXANKO14593 260 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 POLR3GO15318 223 aaPredicted RBP20.34■□□□□ 0.85
PABPN1-207ENST00000556821 ZNF264O43296 627 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 EEF1E1O43324 174 aaKnown RBP20.34■□□□□ 0.85
PABPN1-207ENST00000556821 EFNA2O43921 213 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 UBL4AP11441 157 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 POLR2JP52435 117 aaKnown RBP20.34■□□□□ 0.85
PABPN1-207ENST00000556821 MVDP53602 400 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 SKP2Q13309 424 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 TIGD2Q4W5G0 525 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 PNPT1Q8TCS8 783 aaKnown RBP20.34■□□□□ 0.85
PABPN1-207ENST00000556821 GPR119Q8TDV5 335 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 ZFP90Q8TF47 636 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 VPS33AQ96AX1 596 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 ARSGQ96EG1 525 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 ACBD3Q9H3P7 528 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 TMEM185BQ9H7F4 350 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 POLE3Q9NRF9 147 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 KCNN3Q9UGI6 736 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 ZNF175Q9Y473 711 aa20.34■□□□□ 0.85
PABPN1-207ENST00000556821 A0A1W2PNV4 684 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 GTPBP1O00178 669 aaKnown RBP20.33■□□□□ 0.85
PABPN1-207ENST00000556821 EIF1AYO14602 144 aaKnown RBP20.33■□□□□ 0.85
PABPN1-207ENST00000556821 EIF4E2O60573 245 aaKnown RBP20.33■□□□□ 0.85
PABPN1-207ENST00000556821 BCAS1O75363 584 aaPredicted RBP20.33■□□□□ 0.85
PABPN1-207ENST00000556821 NTN1O95631 604 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 NUDT14O95848 222 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 OPN1LWP04000 364 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 PRKCAP17252 672 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 SHC1P29353 583 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 AQP5P55064 265 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 RPS3AP61247 264 aaKnown RBP20.33■□□□□ 0.85
PABPN1-207ENST00000556821 RAC1P63000 192 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 PLAURQ03405 335 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 FGFBP1Q14512 234 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 PON3Q15166 354 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 GTDC1Q4AE62 458 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 MSANTD1Q6ZTZ1 278 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 P4HA3Q7Z4N8 544 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 ZNF619Q8N2I2 560 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 ANKFN1Q8N957 763 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 FAM71CQ8NEG0 241 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 ZG16BQ96DA0 208 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 MAGEB18Q96M61 343 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 CCDC28BQ9BUN5 200 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 RNF122Q9H9V4 155 aa20.33■□□□□ 0.85
PABPN1-207ENST00000556821 NIPBLQ6KC79 2804 aaeCLIP20.32■□□□□ 0.84
PABPN1-207ENST00000556821 A0A0J9YW62 118 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 FAM234BA2RU67 622 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 ADAMDEC1O15204 470 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 DNAJA2O60884 412 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 AQP8O94778 261 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 H6PDO95479 791 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 ZCCHC18P0CG32 403 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 ELK4P28324 431 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 EIF1P41567 113 aaKnown RBP20.32■□□□□ 0.84
PABPN1-207ENST00000556821 CHRNEQ04844 493 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 SYPL1Q16563 259 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 GPAT3Q53EU6 434 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 VWA1Q6PCB0 445 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 HMGN2P46Q86SG4 172 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 FUNDC1Q8IVP5 155 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 TMCO5AQ8N6Q1 288 aa20.32■□□□□ 0.84
PABPN1-207ENST00000556821 TOR1AIP2Q8NFQ8 470 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms