RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 LAT2Q9GZY6 243 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 ANGPT4Q9Y264 503 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 SLC35A3Q9Y2D2 325 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 PCNX1Q96RV3 2341 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 OR2M5A3KFT3 312 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 CCT8L1PA6NM43 557 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 BCKDKO14874 412 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 LRRTM2O43300 516 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 GCKP35557 465 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 CASP6P55212 293 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 SUMO3P55854 103 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 SRSF1Q07955 248 aaKnown RBP eCLIP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 FOXF1Q12946 379 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 GXYLT1Q4G148 440 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 LIN52Q52LA3 116 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 NHSL2Q5HYW2 709 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 WLSQ5T9L3 541 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 VASNQ6EMK4 673 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF585AQ6P3V2 769 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 NCCRP1Q6ZVX7 275 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 METTL25Q8N6Q8 603 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 HIPK4Q8NE63 616 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 TOR1AIP2Q8NFQ8 470 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 OR5W2Q8NH69 310 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 GPR119Q8TDV5 335 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 PMM1Q92871 262 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF524Q96C55 264 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 TIMP4Q99727 224 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 ECSITQ9BQ95 431 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 GPATCH1Q9BRR8 931 aaKnown RBP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 CACYBPQ9HB71 228 aaKnown RBP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 RLIMQ9NVW2 624 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 CMTM6Q9NX76 183 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 DNAJB12Q9NXW2 375 aaKnown RBP15.83■□□□□ 0.12
SHMT2-225ENST00000556798 ALKBH4Q9NXW9 302 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 CAMK2AQ9UQM7 478 aa15.83■□□□□ 0.12
SHMT2-225ENST00000556798 A0A087WZY1 265 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 H3BML4 177 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 CCL21O00585 134 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 ADAM11O75078 769 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 ACTL6AO96019 429 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 LINGO3P0C6S8 592 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 PABPC4LP0CB38 370 aaKnown RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 ETS2P15036 469 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 RYKP34925 604 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 EEF1A1P68104 462 aaKnown RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 CBFBQ13951 182 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 QPRTQ15274 297 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 C4orf17Q53FE4 359 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF311Q5JNZ3 666 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 FAM91A1Q658Y4 838 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 C8orf82Q6P1X6 216 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 AAGABQ6PD74 315 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 CALHM3Q86XJ0 350 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 CMIPQ8IY22 773 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 RPRMLQ8N4K4 120 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 POC1BQ8TC44 478 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 SMPDL3BQ92485 455 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 RNF145Q96MT1 663 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 RSPO3Q9BXY4 272 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 GMPR2Q9P2T1 348 aaKnown RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 TAGLN3Q9UI15 199 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 ERRFI1Q9UJM3 462 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 CHST2Q9Y4C5 530 aa15.82■□□□□ 0.12
SHMT2-225ENST00000556798 GPC6Q9Y625 555 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 NCOA6Q14686 2063 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 USP9XQ93008 2570 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-225ENST00000556798 CDHR4A6H8M9 788 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 AP3D1O14617 1153 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 MPDZO75970 2070 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 THBS1P07996 1170 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 CHMP24386 653 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 PCGF2P35227 344 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 LHX2P50458 406 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 SLC7A2P52569 658 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 SRYQ05066 204 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 RBBP4Q09028 425 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 LARS2Q15031 903 aaKnown RBP15.81■□□□□ 0.12
SHMT2-225ENST00000556798 VMACQ2NL98 169 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 TMEM44Q2T9K0 475 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 HACD2Q6Y1H2 254 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 ARPINQ7Z6K5 226 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 LSRQ86X29 649 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-225ENST00000556798 SLC15A3Q8IY34 581 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 CLIP4Q8N3C7 705 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 FBXO27Q8NI29 283 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 ZBTB8AQ96BR9 441 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 WDYHV1Q96HA8 205 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 REXO5Q96IC2 774 aaKnown RBP15.81■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF583Q96ND8 569 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 PIGQQ9BRB3 760 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 SPATA9Q9BWV2 254 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 TP63Q9H3D4 680 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-225ENST00000556798 SLC5A6Q9Y289 635 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 ZNF337Q9Y3M9 751 aa15.81■□□□□ 0.12
SHMT2-225ENST00000556798 DOCK7Q96N67 2140 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 A0A1B0GUH1 482 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 FIGNL2A6NMB9 653 aa15.8■□□□□ 0.12
SHMT2-225ENST00000556798 FAM220BPB1ANY3 271 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms