RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 IDH3BO43837 385 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ORC5O43913 435 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PRAMEF10O60809 474 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PRAMEF4O60810 478 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZNF217O75362 1048 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 MTX2O75431 263 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 RCBTB2O95199 551 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR5F1O95221 314 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DNTTP04053 509 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ALPPP05187 535 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 YES1P07947 543 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZNF20P17024 532 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 GABRG2P18507 467 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 C5AR1P21730 350 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 NR4A1P22736 598 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 CPN2P22792 545 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ELAVL4P26378 380 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 HLA-DMAP28067 261 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PBLDP30039 288 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ERP29P30040 261 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TNFSF8P32971 234 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 CA5AP35218 305 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DDOSTP39656 456 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 IL12RB1P42701 662 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR1E2P47887 323 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 MTNR1AP48039 350 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DHPSP49366 369 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TPTEP56180 551 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 RPS15AP62244 130 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PITPNAQ00169 270 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 CDK5Q00535 292 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 SLC13A2Q13183 592 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DNASE1L3Q13609 305 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TPBGQ13641 420 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 QPRTQ15274 297 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 BCL2A1Q16548 175 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 SMN1Q16637 294 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DECR1Q16698 335 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZNF658BQ4V348 819 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 C9orf64Q5T6V5 341 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PRAMEF9Q5VWM5 478 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TMEM236Q5W0B7 351 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TMEM215Q68D42 235 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZNF770Q6IQ21 691 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 KIAA1161Q6NSJ0 714 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TCTN3Q6NUS6 607 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 FAM131AQ6UXB0 335 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 KIAA1324Q6UXG2 1013 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZNF517Q6ZMY9 492 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DEF8Q6ZN54 512 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PARS2Q7L3T8 475 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZNF551Q7Z340 670 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 C16orf62Q7Z3J2 963 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 C11orf74Q86VG3 221 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 CCDC71Q8IV32 467 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 MMAAQ8IVH4 418 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 DEFB119Q8N690 84 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 SIMC1Q8NDZ2 872 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 NUDT10Q8NFP7 164 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR52L1Q8NGH7 329 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR10Q1Q8NGQ4 319 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR2L8Q8NGY9 312 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR52N1Q8NH53 320 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ENKURQ8TC29 256 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 XAGE5Q8WWM1 108 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OIT3Q8WWZ8 545 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ASB15Q8WXK1 588 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ASB12Q8WXK4 309 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PHYHIPQ92561 330 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 C1GALT1C1Q96EU7 318 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 SIPA1Q96FS4 1042 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 NUDT11Q96G61 164 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 COX14Q96I36 57 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 LOXL4Q96JB6 756 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZC3H10Q96K80 434 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 HS6ST2Q96MM7 605 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 GABRG3Q99928 467 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TREX2Q9BQ50 279 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 CNPPD1Q9BV87 410 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 SSBP3Q9BWW4 388 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TSSK6Q9BXA6 273 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZDHHC5Q9C0B5 715 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ARRDC1-AS1Q9H2J1 176 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 SLA2Q9H6Q3 261 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 FOLH1BQ9HBA9 442 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 MRPS30Q9NP92 439 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 POLE3Q9NRF9 147 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 ZCCHC3Q9NUD5 404 aaKnown RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 OR6C2Q9NZP2 312 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 TAAR2Q9P1P5 351 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 COPZ2Q9P299 210 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 KLHL21Q9UJP4 597 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 CAB39Q9Y376 341 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-205ENST00000556622 THADAQ6YHU6 1953 aa5.69□□□□□ -1.5
CPSF2-205ENST00000556622 PLXNA2O75051 1894 aa5.68□□□□□ -1.5
CPSF2-205ENST00000556622 SPAG17Q6Q759 2223 aa5.68□□□□□ -1.5
CPSF2-205ENST00000556622 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.68□□□□□ -1.5
CPSF2-205ENST00000556622 LRIT2A6NDA9 550 aa5.68□□□□□ -1.5
CPSF2-205ENST00000556622 HMGN4O00479 90 aa5.68□□□□□ -1.5
CPSF2-205ENST00000556622 PLPP1O14494 284 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms