RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 CBFBQ13951 182 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 ACKR1Q16570 336 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 KLHL26Q53HC5 615 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 PDZK1Q5T2W1 519 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 C16orf62Q7Z3J2 963 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 C6orf120Q7Z4R8 191 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 VPS37AQ8NEZ2 397 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 PIGTQ969N2 578 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 CPNE4Q96A23 557 aaPredicted RBP9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 ARL8AQ96BM9 186 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 ADGRG7Q96K78 797 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 PARD6BQ9BYG5 372 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 ZNF395Q9H8N7 513 aaPredicted RBP9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 AKTIPQ9H8T0 292 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 EXD2Q9NVH0 621 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 GPATCH2Q9NW75 528 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 POLQO75417 2590 aa9.46□□□□□ -0.9
SPTLC2-205ENST00000556607 F8P00451 2351 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 C7orf72A4D263 438 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 DEFB108AA8MXU0 73 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 SIAH2O43255 324 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 OIP5O43482 229 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 STX11O75558 287 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 UBL4AP11441 157 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 PPP3CBP16298 524 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 PSMA4P25789 261 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ELK4P28324 431 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ADH6P28332 368 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 SHC1P29353 583 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 AGTR1P30556 359 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 PCYT1AP49585 367 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 RPL14P50914 215 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 SUMO3P55854 103 aaPredicted RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 QPRTQ15274 297 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 GUSBP1Q15486 140 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 TOMM34Q15785 309 aaPredicted RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ZNF239Q16600 458 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 EXOSC6Q5RKV6 272 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 CEP85LQ5SZL2 805 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ATAD3BQ5T9A4 648 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 SHEQ5VZ18 495 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 Q71RC1 249 aaPredicted RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 TUSC5Q8IXB3 177 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 RIMKLAQ8IXN7 391 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 PSMA8Q8TAA3 256 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 GPR119Q8TDV5 335 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ZFP90Q8TF47 636 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ABHD3Q8WU67 409 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 PERPQ96FX8 193 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 SDF2Q99470 211 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 THUMPD3Q9BV44 507 aaKnown RBP9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 TMEM109Q9BVC6 243 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 SRXN1Q9BYN0 137 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 NUF2Q9BZD4 464 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ACTR6Q9GZN1 396 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 OR51I1Q9H343 314 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 MKLN1Q9UL63 735 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 ICAM5Q9UMF0 924 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 RAP2CQ9Y3L5 183 aa9.45□□□□□ -0.9
SPTLC2-205ENST00000556607 IGHV3-15A0A0B4J1V0 119 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 A0A1W2PNR3 127 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 RNASET2O00584 256 aaKnown RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 TM9SF1O15321 606 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 BIRC5O15392 142 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 EIF4E2O60573 245 aaKnown RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 PRKD3O94806 890 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 NTN1O95631 604 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 AK1P00568 194 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 CSTAP01040 98 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 UBTFL6P0CB48 400 aaPredicted RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 OR12D1P0DN82 309 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 FOSL1P15407 271 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 PRKCAP17252 672 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 LBPP18428 481 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 BGNP21810 368 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 HOXC12P31275 282 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 CHI3L1P36222 383 aaPredicted RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 NME5P56597 212 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 HPCAP84074 193 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 ZNF844Q08AG5 666 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 SELENBP1Q13228 472 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 STX3Q13277 289 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 CAPRIN1Q14444 709 aaKnown RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 RNPS1Q15287 305 aaKnown RBP9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 SMU1Q2TAY7 513 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 GPAT3Q53EU6 434 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 BEX5Q5H9J7 111 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 Q5PR19 223 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 ANXA8L1Q5VT79 327 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 HHATQ5VTY9 493 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 STAC2Q6ZMT1 411 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 FCRLAQ7L513 359 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 OLIG3Q7RTU3 272 aa9.44□□□□□ -0.9
SPTLC2-205ENST00000556607 CXorf67Q86X51 503 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms