RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 IQCCQ4KMZ1 466 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 CDKL4Q5MAI5 379 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TEDDM1Q5T9Z0 273 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 SULT1C3Q6IMI6 304 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TEPPQ6URK8 271 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 CYP20A1Q6UW02 462 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TFAP2EQ6VUC0 442 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 LARP4Q71RC2 724 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 BHLHA15Q7RTS1 189 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 SSX8Q7RTT4 187 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 GALNT10Q86SR1 603 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PEG10Q86TG7 708 aaKnown RBP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TBC1D1Q86TI0 1168 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PPIL6Q8IXY8 311 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF540Q8NDQ6 660 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 OR52R1Q8NGF1 315 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 OR10D3Q8NH80 312 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ANKRD49Q8WVL7 239 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 C3orf49Q96BT1 292 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 C1GALT1C1Q96EU7 318 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ADGRG7Q96K78 797 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 SOX7Q9BT81 388 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF747Q9BV97 191 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 BRINP2Q9C0B6 783 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PTGES2Q9H7Z7 377 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ZBTB26Q9HCK0 441 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 MAT2BQ9NZL9 334 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PPP4R1LQ9P1A2 415 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 SLC17A6Q9P2U8 582 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 NFU1Q9UMS0 254 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 MGAT4BQ9UQ53 548 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 SNX24Q9Y343 169 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TRIM77I1YAP6 450 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 ADAMDEC1O15204 470 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 AKAP8O43823 692 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CXCL13O43927 109 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CCNT2O60583 730 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 SYNGR4O95473 234 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 TTC4O95801 387 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CT45A8P0DMV1 189 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CT45A9P0DMV2 189 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 COL6A2P12110 1019 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 GCAP28676 217 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 KRT20P35900 424 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 PNLIPRP2P54317 469 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 MRPS22P82650 360 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CHRNB3Q05901 458 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 DDX39BQ13838 428 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF460Q14592 562 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 PPA1Q15181 289 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 TMEM44Q2T9K0 475 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 TRMT12Q53H54 448 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 AWAT1Q58HT5 328 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CT45A2Q5DJT8 189 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 SPANXN3Q5MJ09 141 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 RNASEH2BQ5TBB1 312 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF544Q6NX49 715 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CCDC137Q6PK04 289 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 SLC22A25Q6T423 547 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 NUFIP2Q7Z417 695 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 TXLNBQ8N3L3 684 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 MNS1Q8NEH6 495 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 OR2W6PQ8NHA6 318 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 FBXO25Q8TCJ0 367 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 PHOSPHO1Q8TCT1 267 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 KCTD4Q8WVF5 259 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 MAGOHBQ96A72 148 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 MUCL1Q96DR8 90 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 MTERF1Q99551 399 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 RBM4Q9BWF3 364 aaKnown RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 TRIM31Q9BZY9 425 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 METTL17Q9H7H0 456 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-236ENST00000556220 SMYD2Q9NRG4 433 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 SDHAF3Q9NRP4 125 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 NPAP1Q9NZP6 1156 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 FBXL7Q9UJT9 491 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 CES1P1Q9UKY3 287 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 TSC22D4Q9Y3Q8 395 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 PCDHGB1Q9Y5G3 927 aa6.02□□□□□ -1.45
ATXN3-236ENST00000556220 LOC390937A0A1W2PQ73 354 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 LRP5LA4QPB2 252 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF814B7Z6K7 855 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 CCDC188H7C350 402 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 SCO2O43819 266 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 FADS1O60427 444 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 PIAS1O75925 651 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 BCAS2O75934 225 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-236ENST00000556220 KRT14P02533 472 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 GBAP04062 536 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 SHBGP04278 402 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 ATP1B1P05026 303 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 PABPC4LP0CB38 370 aaKnown RBP6.01□□□□□ -1.45
ATXN3-236ENST00000556220 IL12BP29460 328 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 EVI2BP34910 448 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 FEN1P39748 380 aaKnown RBP6.01□□□□□ -1.45
ATXN3-236ENST00000556220 TAS2R39P59534 338 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 GPX6P59796 221 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 PSPHP78330 225 aa6.01□□□□□ -1.45
ATXN3-236ENST00000556220 CKAP4Q07065 602 aaKnown RBP6.01□□□□□ -1.45
ATXN3-236ENST00000556220 CUL3Q13618 768 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms