RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CENPVL1A0A0U1RR11 272 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 A0A1B0GX78 115 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TCRBV16S1A1N1A0A5B0 115 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 CPSF4LA6NMK7 179 aaKnown RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ENO4A6NNW6 628 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 H3BN98 237 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PEX12O00623 359 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 FRS3O43559 492 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ATE1O95260 518 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 IGKV1D-16P01601 117 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 IGKV3-11P04433 115 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TNNI3P19429 210 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 POU1F1P28069 291 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 HTR2AP28223 471 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 RBM34P42696 430 aaKnown RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PPICP45877 212 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PPM1FP49593 454 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SEPHS1P49903 392 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ATP12AP54707 1039 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 CTBP2P56545 445 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 DCAF7P61962 342 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PSPHP78330 225 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 RHAGQ02094 409 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ACY1Q03154 408 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PRKCDQ05655 676 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ST3GAL4Q11206 333 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ERV3-1Q14264 604 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 GINS1Q14691 196 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 OR1Q1Q15612 314 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ELAVL1Q15717 326 aaKnown RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SYT16Q17RD7 645 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TMEM44Q2T9K0 475 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 HLA-BQ31612 363 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 GON4LQ3T8J9 2241 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 FLYWCH1Q4VC44 716 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PLAG1Q6DJT9 500 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SLC27A4Q6P1M0 643 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 NPSR1Q6W5P4 371 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 LINC00299Q6ZSB3 139 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TTLL10Q6ZVT0 673 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TMPRSS11FQ6ZWK6 438 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 AHSA2Q719I0 299 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF550Q7Z398 422 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ARHGAP22Q7Z5H3 698 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 KIF18BQ86Y91 864 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 NKAIN4Q8IVV8 208 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 C1orf210Q8IVY1 113 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 NLGN4XQ8N0W4 816 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SLC43A2Q8N370 569 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 Q8N9G6 341 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 POGLUT1Q8NBL1 392 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PLPP5Q8NEB5 264 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 C16orf52Q8NHV5 167 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 WDR36Q8NI36 951 aaKnown RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 BRIX1Q8TDN6 353 aaKnown RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 DOK4Q8TEW6 326 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PTPMT1Q8WUK0 201 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SENP5Q96HI0 755 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PTCHD1Q96NR3 888 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 CCNL2Q96S94 520 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PRSS27Q9BQR3 290 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 FUNDC2Q9BWH2 189 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TEX12Q9BXU0 123 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 PRRG3Q9BZD7 231 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TMEM27Q9HBJ8 222 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 CAPN10Q9HC96 672 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF304Q9HCX3 659 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 MKKSQ9NPJ1 570 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 FGF21Q9NSA1 209 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 MED17Q9NVC6 651 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 SCN3AQ9NY46 2000 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 KLHL3Q9UH77 587 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF223Q9UK11 482 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 FBXO4Q9UKT5 387 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 TMEM5Q9Y2B1 443 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 RPL36Q9Y3U8 105 aaKnown RBP7.65□□□□□ -1.18
ATXN3-235ENST00000556082 U3KQA8 63 aa7.65□□□□□ -1.18
ATXN3-235ENST00000556082 IGLV3-12A0A075B6K2 115 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 IRGMA1A4Y4 181 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 CLDN24A6NM45 220 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 SNTNA6NMZ2 147 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 EFCAB7A8K855 629 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 C17orf105B2RV13 164 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 HRKO00198 91 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 TO15178 435 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 SLC22A1O15245 554 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 SIGLEC6O43699 453 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 ENTPD6O75354 484 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 BCAS1O75363 584 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-235ENST00000556082 GABARAPO95166 117 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 PDGFBP01127 241 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-235ENST00000556082 IFNA16P05015 189 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 HMGN1P05114 100 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 IGFBP1P08833 259 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-235ENST00000556082 PRG2P13727 222 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 FBLP22087 321 aaKnown RBP7.64□□□□□ -1.19
ATXN3-235ENST00000556082 C21orf33P30042 268 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-235ENST00000556082 PEX19P40855 299 aa7.64□□□□□ -1.19
ATXN3-235ENST00000556082 ACAA2P42765 397 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms