RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FAM71CQ8NEG0 241 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 OR14L1PQ8NHC6 308 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ZNF563Q8TA94 476 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 CPT1CQ8TCG5 803 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ST8SIA1Q92185 356 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ZBTB8AQ96BR9 441 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 SLC7A6OSQ96CW6 309 aaPredicted RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 SNRNP40Q96DI7 357 aaKnown RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 ARSGQ96EG1 525 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 C1GALT1C1Q96EU7 318 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 NSMCE2Q96MF7 247 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 SFXN2Q96NB2 322 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 TAAR6Q96RI8 345 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 RTN4RQ9BZR6 473 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 TRIM15Q9C019 465 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 DEFB127Q9H1M4 99 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ZNF703Q9H7S9 590 aaPredicted RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 ASF1BQ9NVP2 202 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 TAS2R10Q9NYW0 307 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 CD300AQ9UGN4 299 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 EGFL7Q9UHF1 273 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 FBXL2Q9UKC9 423 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ICAM5Q9UMF0 924 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 NPIPA1Q9UND3 350 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 SAMD4AQ9UPU9 718 aaKnown RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 SNX13Q9Y5W8 968 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 MED12Q93074 2177 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 CELSR3Q9NYQ7 3312 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 CENPVL1A0A0U1RR11 272 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 FAAHO00519 579 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 AP3D1O14617 1153 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 GSC2O15499 205 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 GMFGO60234 142 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 SUSD5O60279 629 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 CDC40O60508 579 aaKnown RBP eCLIP6.94□□□□□ -1.3
TDP1-214ENST00000556063 ZNF682O95780 498 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ACTL6AO96019 429 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 OPN1SWP03999 348 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 HPNP05981 417 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RFPL3SP0C7P2 107 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 GP1BBP13224 206 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 EDN3P14138 238 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ADH6P28332 368 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 IFNA8P32881 189 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RYKP34925 604 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 MAGEA5P43359 124 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 HTR3AP46098 478 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 KCNJ5P48544 419 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RNF144AP50876 292 aaPredicted RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 RGS8P57771 180 aaPredicted RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 SELENOWP63302 87 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 DMTNQ08495 405 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 TRAP1Q12931 704 aaKnown RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 CEACAM7Q14002 265 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 TRIM25Q14258 630 aaKnown RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 FXNQ16595 210 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.94□□□□□ -1.3
TDP1-214ENST00000556063 SOWAHCQ53LP3 525 aaPredicted RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 CYBRD1Q53TN4 286 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 MTX3Q5HYI7 312 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RNFT1Q5M7Z0 435 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RAET1LQ5VY80 246 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ZNF324BQ6AW86 544 aaPredicted RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 ARHGAP11AQ6P4F7 1023 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 CBLN3Q6UW01 205 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ENPP6Q6UWR7 440 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 GFRALQ6UXV0 394 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 FKBP9P1Q75LS8 142 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 PRICKLE2Q7Z3G6 844 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RANBP3LQ86VV4 465 aaPredicted RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 ATCAYQ86WG3 371 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 DHFR2Q86XF0 187 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 CLIP4Q8N3C7 705 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 SMYD1Q8NB12 490 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 CNOT9Q92600 299 aaKnown RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 TAMM41Q96BW9 452 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 SARAFQ96BY9 339 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ASB9Q96DX5 294 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 TPD52L3Q96J77 140 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 MRGPRX4Q96LA9 322 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 LRGUKQ96M69 825 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 GPR137Q96N19 417 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 BBC3Q96PG8 261 aaPredicted RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 PIGQQ9BRB3 760 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 TRIM2Q9C040 744 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 OR2B2Q9GZK3 357 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 LRMDAQ9H2I8 198 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 UBQLN3Q9H347 655 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ZDHHC11Q9H8X9 412 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 GORASP2Q9H8Y8 452 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 TMEM27Q9HBJ8 222 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 SERINC1Q9NRX5 453 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 MED17Q9NVC6 651 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RLIMQ9NVW2 624 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 DNAJB12Q9NXW2 375 aaKnown RBP6.94□□□□□ -1.3
TDP1-214ENST00000556063 SELENONQ9NZV5 590 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 ACTR3BQ9P1U1 418 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 RPS6KB2Q9UBS0 482 aa6.94□□□□□ -1.3
TDP1-214ENST00000556063 PACSIN3Q9UKS6 424 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms