RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 CORO2BQ9UQ03 480 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 L3MBTL1Q9Y468 752 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 PCDHB14Q9Y5E9 798 aa10.93□□□□□ -0.66
SRP54-206ENST00000555317 GPC6Q9Y625 555 aaPredicted RBP10.93□□□□□ -0.66
SRP54-206ENST00000555317 A0A1W2PP18 115 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 MBD3L4A6NDZ8 208 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 MBD3L3A6NE82 208 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 MBD3L5A6NJ08 208 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 GJE1A6NN92 205 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 EVPLLA8MZ36 301 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 C5orf58C9J3I9 102 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 CLIC1O00299 241 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 CHRM4P08173 479 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 SNRPB2P08579 225 aaKnown RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 TMIGD3P0DMS9 266 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 FCGR2AP12318 317 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 ETFAP13804 333 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 UQCRBP14927 111 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 IL7RP16871 459 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 PGCP20142 388 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 ELK4P28324 431 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 OPRM1P35372 400 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 EIF1AXP47813 144 aaKnown RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 CHRNEQ04844 493 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 FUT5Q11128 374 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 FOXF1Q12946 379 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 FADDQ13158 208 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 CDSNQ15517 529 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 GTDC1Q4AE62 458 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 OR2A2Q6IF42 318 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 CBLN3Q6UW01 205 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 FUNDC1Q8IVP5 155 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 ANKFN1Q8N957 763 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 MBD3L2Q8NHZ7 208 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 WDR60Q8WVS4 1066 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 PMM1Q92871 262 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 MARVELD3Q96A59 401 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 PINK1Q9BXM7 581 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 PRRG4Q9BZD6 226 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 UCK2Q9BZX2 261 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 LAT2Q9GZY6 243 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 PAIP1Q9H074 479 aaKnown RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 SAP130Q9H0E3 1048 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 TMEM185BQ9H7F4 350 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 MTHFD2LQ9H903 347 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 PAQR5Q9NXK6 330 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 LEF1Q9UJU2 399 aaPredicted RBP10.92□□□□□ -0.66
SRP54-206ENST00000555317 ICAM5Q9UMF0 924 aa10.92□□□□□ -0.66
SRP54-206ENST00000555317 KIAA1549Q9HCM3 1950 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 KDM4EB2RXH2 506 aaPredicted RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 EEF1E1-BLOC1S5C9J1V9 151 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 EEF1E1O43324 174 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 OIP5O43482 229 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 SYNGR4O95473 234 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 BCHEP06276 602 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 DBIP07108 87 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CAPN3P20807 821 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CTSSP25774 331 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 ADH6P28332 368 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CEACAM8P31997 349 aaPredicted RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 MDH1P40925 334 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 CLDN15P56746 228 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CLDN20P56880 219 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 RAC1P63000 192 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 SF3A3Q12874 501 aaKnown RBP eCLIP10.91□□□□□ -0.66
SRP54-206ENST00000555317 SKP2Q13309 424 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 FGFBP1Q14512 234 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 QPRTQ15274 297 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 TMEM44Q2T9K0 475 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 SEM1Q6ZVN7 128 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 HMGN2P46Q86SG4 172 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 DHDDSQ86SQ9 333 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CMIPQ8IY22 773 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 C9orf106Q8NAJ2 232 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 FBXO27Q8NI29 283 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 ZNF563Q8TA94 476 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 GPR119Q8TDV5 335 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 TMEM234Q8WY98 164 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 ST8SIA1Q92185 356 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 INTS12Q96CB8 462 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 REXO5Q96IC2 774 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 MRGPRX4Q96LA9 322 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 UCN2Q96RP3 112 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 THUMPD3Q9BV44 507 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 SFXN3Q9BWM7 321 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CCDC134Q9H6E4 229 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 ARMC7Q9H6L4 198 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 TIGARQ9NQ88 270 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 CLCF1Q9UBD9 225 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 ZNF629Q9UEG4 869 aaPredicted RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 MCTS1Q9ULC4 181 aaKnown RBP10.91□□□□□ -0.66
SRP54-206ENST00000555317 NDUFAF1Q9Y375 327 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 ZNF175Q9Y473 711 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 TEX15Q9BXT5 2789 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 TACC2O95359 2948 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 HCFC1P51610 2035 aa10.91□□□□□ -0.66
SRP54-206ENST00000555317 DCHS2Q6V1P9 2916 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms