RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ZNF26P17031 533 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 PSMA4P25789 261 aaKnown RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 GDF1P27539 372 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 KCNJ5P48544 419 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ATP12AP54707 1039 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 SESN3P58005 492 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 VLDLRP98155 873 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 TLE1Q04724 770 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 CHRNB3Q05901 458 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 C17orf67Q0P5P2 114 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 GPR68Q15743 365 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ATP6AP1Q15904 470 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 HYAL4Q2M3T9 481 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 FAM98BQ52LJ0 330 aaKnown RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 LRRC23Q53EV4 343 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 INTS11Q5TA45 600 aaKnown RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 TIGD3Q6B0B8 471 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 DESI1Q6ICB0 168 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 TYW3Q6IPR3 259 aaKnown RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 TBPL2Q6SJ96 375 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 FRRS1Q6ZNA5 592 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 TMEM179BQ7Z7N9 219 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ZAR1Q86SH2 424 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 PATL1Q86TB9 770 aaKnown RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 SMYD1Q8NB12 490 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 OR4K17Q8NGC6 315 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 OR4D11Q8NGI4 311 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 RNF138Q8WVD3 245 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 SLC47A1Q96FL8 570 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 HSH2DQ96JZ2 352 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 SLX1AQ9BQ83 275 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF703Q9H7S9 590 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 PTGES2Q9H7Z7 377 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 QPCTLQ9NXS2 382 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 FLRT3Q9NZU0 649 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 STOML1Q9UBI4 398 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 RPS6KA6Q9UK32 745 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 MKLN1Q9UL63 735 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 SAMD4AQ9UPU9 718 aaKnown RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ANGPT4Q9Y264 503 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 C15orf41Q9Y2V0 281 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 LRRC42Q9Y546 428 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 FLNBO75369 2602 aaKnown RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 CENPVL1A0A0U1RR11 272 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 PINLYPA6NC86 204 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 NPIPA5E9PKD4 350 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 GNB5O14775 395 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 CLOCKO15516 846 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 GLSO94925 669 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 EDN3P14138 238 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 TNFRSF1BP20333 461 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 FASP25445 335 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 PEX2P28328 305 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 PTGDSP41222 190 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 RBPJQ06330 500 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 FOXO1Q12778 655 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 GANABQ14697 944 aaKnown RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 TOMM20Q15388 145 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 MAPK14Q16539 360 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 KRTCAP3Q53RY4 240 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 HMGN2P46Q86SG4 172 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF605Q86T29 641 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 MARCH3Q86UD3 253 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 KRT73Q86Y46 540 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 PLCZ1Q86YW0 608 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 PEX5LQ8IYB4 626 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 TMEM251Q8N6I4 163 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 OR4C3Q8NH37 302 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 BBS10Q8TAM1 723 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 POP5Q969H6 163 aaKnown RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 CENPNQ96H22 339 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 TPD52L3Q96J77 140 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 AMBRA1Q9C0C7 1298 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 QRSL1Q9H0R6 528 aaKnown RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 TSPAN10Q9H1Z9 355 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 ARMC7Q9H6L4 198 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 EXO5Q9H790 373 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 COQ10BQ9H8M1 238 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 MTHFD2LQ9H903 347 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-218ENST00000555213 PROK2Q9HC23 129 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 VNN3Q9NY84 501 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 NDUFAF4Q9P032 175 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 SEC14L3Q9UDX4 400 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 DKKL1Q9UK85 242 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 NPIPA1Q9UND3 350 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 NTNG1Q9Y2I2 539 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 DTNAQ9Y4J8 743 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 EXPH5Q8NEV8 1989 aa9.94□□□□□ -0.82
SHMT2-218ENST00000555213 ATMQ13315 3056 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 NPIPA5A0A0B4J1W7 369 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 SERINC4A6NH21 518 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 NPIPA7E9PJI5 369 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 NPIPB9F8W1W9 429 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 GTPBP1O00178 669 aaKnown RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 DLGAP1O14490 977 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 HCRTR2O43614 444 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 CDC40O60508 579 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 TPST2O60704 377 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 CBR3O75828 277 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 TRAPPC6AO75865 159 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms