RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CNIH3Q8TBE1 160 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 FAM110BQ8TC76 370 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 FAM222BQ8WU58 562 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 BADQ92934 168 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 SGK3Q96BR1 496 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 MOCOSQ96EN8 888 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 TGS1Q96RS0 853 aaKnown RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 TMEM121Q9BTD3 319 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 C20orf24Q9BUV8 137 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 TRIM62Q9BVG3 475 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 FBXO44Q9H4M3 255 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 DCAF13Q9NV06 445 aaKnown RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 IL36GQ9NZH8 169 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 AFF2P51816 1311 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 MAP3K19Q56UN5 1328 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 A0A1W2PNV4 684 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SMCO3A2RU48 225 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 LRIT2A6NDA9 550 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 NPIPA7E9PJI5 369 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 PDLIM1O00151 329 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 WWP2O00308 870 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 TRDMT1O14717 391 aaKnown RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 E2F6O75461 281 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 CLPXO76031 633 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 LRATO95237 230 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GNA14O95837 355 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 F10P00742 488 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 CA1P00915 261 aaPredicted RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 GAPDHP04406 335 aaKnown RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 STAG3L2P0CL84 134 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 NPIPA8P0DM63 369 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 RPL35AP18077 110 aaKnown RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 AOC1P19801 751 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 PTNP21246 168 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GSTM3P21266 225 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GIFP27352 417 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SOX3P41225 446 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SLC7A2P52569 658 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 EFNB2P52799 333 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 PLP1P60201 277 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 NTHL1P78549 312 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 OGDHQ02218 1023 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 IRF8Q02556 426 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GPR17Q13304 367 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 CRMP1Q14194 572 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SLC17A1Q14916 467 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 UBE2V2Q15819 145 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 RFTN2Q52LD8 501 aaPredicted RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 SBK1Q52WX2 424 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SLX4IPQ5VYV7 408 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 BSPRYQ5W0U4 402 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SPINK14Q6IE38 97 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 NEPROQ6NW34 567 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GCNT7Q6ZNI0 430 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 MOB3BQ86TA1 216 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 TRIM69Q86WT6 500 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 OR4N5Q8IXE1 308 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 MICU2Q8IYU8 434 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 FBXL16Q8N461 479 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 FBXO25Q8TCJ0 367 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GPX8Q8TED1 209 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 MITD1Q8WV92 249 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 NRGNQ92686 78 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SLC38A4Q969I6 547 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 TMEM143Q96AN5 459 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 NRBF2Q96F24 287 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 PPP1R16AQ96I34 528 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GMPPAQ96IJ6 420 aaPredicted RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SLC6A7Q99884 636 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SLC30A2Q9BRI3 323 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 TEKT3Q9BXF9 490 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 C8orf33Q9H7E9 229 aaPredicted RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 INTS9Q9NV88 658 aaKnown RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 MRPL39Q9NYK5 338 aaKnown RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 PSMC3IPQ9P2W1 217 aaPredicted RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 PRPF19Q9UMS4 504 aaKnown RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 NPIPA1Q9UND3 350 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 PYGO1Q9Y3Y4 419 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 GMEB1Q9Y692 573 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 MAD1L1Q9Y6D9 718 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 SALL1Q9NSC2 1324 aa4.39□□□□□ -1.71
VRK1-203ENST00000555067 RPAP1Q9BWH6 1393 aaPredicted RBP4.39□□□□□ -1.71
VRK1-203ENST00000555067 A0A0A6YYD4 124 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 OR6C74A6NCV1 312 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 K7ERQ8 282 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 SLC1A7O00341 560 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 CYB561D2O14569 222 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 RS1O15537 224 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 RRP8O43159 456 aaKnown RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 KHDRBS3O75525 346 aaKnown RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 OR2F2O95006 317 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 NADKO95544 446 aaPredicted RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 MBP02144 154 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 GPIP06744 558 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 ERCC1P07992 297 aaPredicted RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 CLTAP09496 248 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 PRKAR1AP10644 381 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms