RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ASPGQ86U10 573 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 CLDN22Q8N7P3 220 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SRFBP1Q8NEF9 429 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 TMEM239Q8WW34 195 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 AKAP1Q92667 903 aaKnown RBP eCLIP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 AICDAQ9GZX7 198 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SYNPO2LQ9H987 977 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 CD93Q9NPY3 652 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ZSCAN32Q9NX65 697 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 MED31Q9Y3C7 131 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 A0A0A6YYD5 115 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 GXYLT2A0PJZ3 443 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ACOD1A6NK06 481 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 I3L521 148 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SGK494L7N484 410 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 EFCAB14O75071 495 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 GATBO75879 557 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 RGS9O75916 674 aaPredicted RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 FBXO45P0C2W1 286 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 F3P13726 295 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 DDOSTP39656 456 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 OC90Q02509 493 aaPredicted RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 POU4F3Q15319 338 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 RPE65Q16518 533 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF836Q6ZNA1 936 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 DEFB119Q8N690 84 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 BPIFA2Q96DR5 249 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SNX18Q96RF0 628 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 TNFRSF13CQ96RJ3 184 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ATF6BQ99941 703 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 RPP25Q9BUL9 199 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SIDT1Q9NXL6 827 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 HCN3Q9P1Z3 774 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ING4Q9UNL4 249 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SPACA6W5XKT8 324 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 IRGMA1A4Y4 181 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 RNF13O43567 381 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 HLA-DQA2P01906 255 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 PRKCAP17252 672 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ATP12AP54707 1039 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CDK5Q00535 292 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ASAH1Q13510 395 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 RUNX3Q13761 415 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 GPR176Q14439 515 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 OR1Q1Q15612 314 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ACSM3Q53FZ2 586 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 NUDT18Q6ZVK8 323 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 C17orf47Q8NEP4 570 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 TMIEQ8NEW7 156 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 TTLQ8NG68 377 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CACNG6Q9BXT2 260 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 EPHX3Q9H6B9 360 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 BABAM2Q9NXR7 383 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CALML5Q9NZT1 146 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF346Q9UL40 294 aaKnown RBP11.03□□□□□ -0.64
XRCC3-208ENST00000554811 COLEC10Q9Y6Z7 277 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 MEIS3P1A6NDR6 274 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 DUXAA6NLW8 204 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 DOK2O60496 412 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 MT-ND5P03915 603 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 MAKP20794 623 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 DRD3P35462 400 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ERVK-21P61565 698 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CHMP1BQ7LBR1 199 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 C7orf61Q8IZ16 206 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 VWCEQ96DN2 955 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CCDC120Q96HB5 630 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 PRDM7Q9NQW5 492 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 TMEM74BQ9NUR3 256 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 NDOR1Q9UHB4 597 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ADAM18Q9Y3Q7 739 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CDH10Q9Y6N8 788 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 PLXNB3Q9ULL4 1909 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 DSPPQ9NZW4 1301 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 SURF4O15260 269 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 FGF19O95750 216 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 EFEMP2O95967 443 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 TP53P04637 393 aaPredicted RBP11.03□□□□□ -0.64
XRCC3-208ENST00000554811 HSD17B2P37059 387 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 AP2S1P53680 142 aaPredicted RBP11.03□□□□□ -0.64
XRCC3-208ENST00000554811 GPM6BQ13491 265 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 FGL2Q14314 439 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ANGPT1Q15389 498 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF620Q6ZNG0 422 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 CDH24Q86UP0 819 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 SUN5Q8TC36 379 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 GHSRQ92847 366 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 WDR34Q96EX3 536 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 SENP5Q96HI0 755 aaPredicted RBP11.03□□□□□ -0.64
XRCC3-208ENST00000554811 LMAN2LQ9H0V9 348 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 OR10A4Q9H209 315 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF224Q9NZL3 707 aa11.03□□□□□ -0.64
XRCC3-208ENST00000554811 MRPS2Q9Y399 296 aaKnown RBP11.03□□□□□ -0.64
XRCC3-208ENST00000554811 ASB4Q9Y574 426 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms