RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 MED12Q93074 2177 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 TRGV5A0A0B4J1U4 118 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 FIGNL2A6NMB9 653 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ADAM10O14672 748 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 BCKDKO14874 412 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 SUSD5O60279 629 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 IGHG3P01860 377 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 FABP3P05413 133 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 CELA3AP09093 270 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 NUDT7P0C024 238 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ARAFP10398 606 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 THRBP10828 461 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ETFAP13804 333 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 S1PR1P21453 382 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ABCD3P28288 659 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 GRNP28799 593 aaKnown RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 CHI3L1P36222 383 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 CRATP43155 626 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 MASP1P48740 699 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 LTB4RQ15722 352 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 NNATQ16517 81 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 KCTD21Q4G0X4 260 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 LIN52Q52LA3 116 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 CYBRD1Q53TN4 286 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 SAXO2Q658L1 398 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 OR2T5Q6IEZ7 315 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 SHQ1Q6PI26 577 aaKnown RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 TRILQ7L0X0 811 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 PATL1Q86TB9 770 aaKnown RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 CCDC116Q8IYX3 515 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 CLEC4FQ8N1N0 589 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 OR5M9Q8NGP3 310 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 OR2T29Q8NH02 315 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 NEURL3Q96EH8 262 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 NRBF2Q96F24 287 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ZBED6CLQ96FA7 236 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 HSH2DQ96JZ2 352 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF681Q96N22 645 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 BBS4Q96RK4 519 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 MYCBPQ99417 103 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 NXF5Q9H1B4 397 aaKnown RBP11.36□□□□□ -0.59
SHMT2-214ENST00000554604 PRODH2Q9UF12 536 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 ACAD8Q9UKU7 415 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 LIPGQ9Y5X9 500 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 DCHS2Q6V1P9 2916 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 HCFC1P51610 2035 aa11.36□□□□□ -0.59
SHMT2-214ENST00000554604 SMIM31A0A1B0GVY4 71 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 ANKRD33BA6NCL7 494 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 AQP7O14520 342 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 GCM2O75603 506 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 SNAP29O95721 258 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 CLPTM1O96005 669 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RFPL3SP0C7P2 107 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 PABPC4LP0CB38 370 aaKnown RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 COX6B1P14854 86 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 GDF1P27539 372 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 MPIP34949 423 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 SOAT1P35610 550 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 MAGEA8P43361 318 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RPL5P46777 297 aaKnown RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 PRIM2P49643 509 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 MANFP55145 182 aaKnown RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 DCAF7P61962 342 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 DUSP2Q05923 314 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 MGAT2Q10469 447 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 SCARB2Q14108 478 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RFX4Q33E94 735 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 GXYLT1Q4G148 440 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 TRMT12Q53H54 448 aaKnown RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 COX20Q5RI15 118 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 OTUD3Q5T2D3 398 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RNF220Q5VTB9 566 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF585AQ6P3V2 769 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 ANGPTL8Q6UXH0 198 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RNF130Q86XS8 419 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 OR52R1Q8NGF1 315 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 CYGBQ8WWM9 190 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RND1Q92730 232 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 SARAFQ96BY9 339 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 CTHRC1Q96CG8 243 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 HSPBAP1Q96EW2 488 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 RMND5BQ96G75 393 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 LCORQ96JN0 433 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 SECISBP2Q96T21 854 aaKnown RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 ITPAQ9BY32 194 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF703Q9H7S9 590 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-214ENST00000554604 CXorf36Q9H7Y0 433 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 METTL7AQ9H8H3 244 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 SLC35C2Q9NQQ7 365 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 TNFRSF10DQ9UBN6 386 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 BAG5Q9UL15 447 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 ANGPT4Q9Y264 503 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 DTX4Q9Y2E6 619 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 HRH3Q9Y5N1 445 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 TACC2O95359 2948 aa11.35□□□□□ -0.59
SHMT2-214ENST00000554604 A0A1B0GVC2 190 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TRIM64A6NGJ6 449 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 LRRC3CA6NJW4 275 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms