RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CYSRT1A8MQ03 144 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SGK494L7N484 410 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PCDH7O60245 1069 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TSPAN3O60637 253 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TPST2O60704 377 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PRAMEF4O60810 478 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SLC43A1O75387 559 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SEMA3DO95025 777 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SEMA4FO95754 770 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CD160O95971 181 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TSPAN19P0C672 248 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 HSMCR30P0CW71 290 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 LAMP1P11279 417 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PEPDP12955 493 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 IFNA8P32881 189 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CHI3L1P36222 383 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CRATP43155 626 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 NR4A2P43354 598 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 BTG1P62324 171 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 BDH1Q02338 343 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TLE3Q04726 772 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ACSM1Q08AH1 577 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CNTN1Q12860 1018 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 MAB21L1Q13394 359 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TPBGQ13641 420 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF234Q14588 700 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 HEPACAMQ14CZ8 416 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TRAM1Q15629 374 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 EXOC3L2Q2M3D2 409 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 C18orf21Q32NC0 220 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 BCL7AQ4VC05 210 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SYTL3Q4VX76 610 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 MPPE1Q53F39 396 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 DCST1Q5T197 706 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 C6orf183Q5T699 404 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 HES3Q5TGS1 186 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PRAMEF8Q5VWM4 474 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 C1QL3Q5VWW1 255 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PRAMEF7Q5VXH5 474 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 BRAT1Q6PJG6 821 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PCSK4Q6UW60 755 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 FAM131AQ6UXB0 335 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SERPINA13PQ6UXR4 307 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF551Q7Z340 670 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 NRARPQ7Z6K4 114 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 THOC6Q86W42 341 aaKnown RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 LAS2Q8IYD9 372 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SLC7A5P1Q8MH63 180 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 FAM109AQ8N4B1 249 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TRAM1L1Q8N609 369 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 AQP11Q8NBQ7 271 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 DUSP18Q8NEJ0 188 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TOR1AIP2Q8NFQ8 470 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 OR5M3Q8NGP4 307 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CXorf40AQ8TE69 158 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CREB3L4Q8TEY5 395 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SKA2Q8WVK7 121 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 DNAJA4Q8WW22 397 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 JPH3Q8WXH2 748 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 UFD1Q92890 307 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 RFKQ969G6 155 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 WBP2Q969T9 261 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SH3KBP1Q96B97 665 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CREB3L1Q96BA8 519 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 OPALINQ96PE5 141 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 BARD1Q99728 777 aaKnown RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SLC35A5Q9BS91 424 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ZSCAN5AQ9BUG6 496 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ALOXE3Q9BYJ1 711 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 NLNQ9BYT8 704 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 POLR2J2Q9GZM3 115 aaKnown RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 KCNN2Q9H2S1 579 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 FAM83DQ9H4H8 585 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ANKRD19PQ9H560 264 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TRIM45Q9H8W5 580 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 SGK2Q9HBY8 427 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 HHATLQ9HCP6 504 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 FGF20Q9NP95 211 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 EXOSC4Q9NPD3 245 aaKnown RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF275Q9NSD4 429 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 ACOXLQ9NUZ1 547 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 MED17Q9NVC6 651 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 RBFOX1Q9NWB1 397 aaKnown RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 QPCTLQ9NXS2 382 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 COPZ2Q9P299 210 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 KLHL20Q9Y2M5 609 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 CFAP20Q9Y6A4 193 aaKnown RBP5.51□□□□□ -1.53
VPS33B-203ENST00000554264 RNF215Q9Y6U7 377 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 MAU2Q9Y6X3 613 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 TRDV1A0A1B0GX56 115 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 A0A1W2PPC4 97 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 A0A1W2PQ09 198 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 A0A1W2PRQ8 180 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TRBC2A0A5B9 178 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TUBAL3A6NHL2 446 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GABRR3A8MPY1 467 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 B4DXG7 233 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 C1QTNF3-AMACRE9PGA6 284 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 POLR1CO15160 346 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms