RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 HMGN1P05114 100 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CT62P0C5K7 136 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 PAICSP22234 425 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 NDUFS1P28331 727 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TEAD1P28347 426 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SLC6A1P30531 599 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 IFNA8P32881 189 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ACVR1BP36896 505 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TSFMP43897 325 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 MTNR1BP49286 362 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 INPP1P49441 399 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SLC16A1P53985 500 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 RPS7P62081 194 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 RUNX3Q13761 415 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CRMP1Q14194 572 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 EXOSC7Q15024 291 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TMEM44Q2T9K0 475 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 PLA1AQ53H76 456 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 DCST2Q5T1A1 773 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SFXN4Q6P4A7 337 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 MZT2AQ6P582 158 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 MAMSTRQ6ZN01 415 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 LIX1LQ8IVB5 337 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR5T3Q8NGG3 340 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR5H6Q8NGV6 325 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR5W2Q8NH69 310 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR14C36Q8NHC7 312 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 GRHL3Q8TE85 626 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 LCN9Q8WX39 176 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 C4orf36Q96KX1 117 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 PGLYRP3Q96LB9 341 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 HS6ST2Q96MM7 605 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ABHD1Q96SE0 405 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 KXD1Q9BQD3 176 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 APOOQ9BUR5 198 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SLC17A9Q9BYT1 436 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR51V1Q9H2C8 321 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 KIR3DX1Q9H7L2 352 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 MTHFD2LQ9H903 347 aaPredicted RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SLC28A3Q9HAS3 691 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ADGRL4Q9HBW9 690 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CYSLTR2Q9NS75 346 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 NLGN3Q9NZ94 848 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 H2AFY2Q9P0M6 372 aaPredicted RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 USP36Q9P275 1121 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ZNF624Q9P2J8 865 aaPredicted RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 DPP7Q9UHL4 492 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CLEC4AQ9UMR7 237 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 COL4A2P08572 1712 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 EML5Q05BV3 1969 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 VCANP13611 3396 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ARHGEF17Q96PE2 2063 aaPredicted RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 LOC105369274A0A096LPK9 316 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 GXYLT2A0PJZ3 443 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 PRSS38A1L453 326 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CDHR4A6H8M9 788 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 LRRC72A6NJI9 287 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SLC9B1P1A6NJY1 282 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 FGF17O60258 216 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 PPP1R3DO95685 299 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ADH1BP00325 375 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SYPP08247 313 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CPMP14384 443 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 C5AR1P21730 350 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SLC2A5P22732 501 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CFL1P23528 166 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 PTBP1P26599 531 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ERP29P30040 261 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 HCCSP53701 268 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR12D2P58182 307 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 FOXK2Q01167 660 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 BDH1Q02338 343 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 DUSP8Q13202 625 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SRSF5Q13243 272 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TNK1Q13470 666 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 BCL2L15Q5TBC7 163 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TIGD3Q6B0B8 471 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 FBXO42Q6P3S6 717 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ZC3H14Q6PJT7 736 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ESPNLQ6ZVH7 1005 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 RD3Q7Z3Z2 195 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 RANBP3LQ86VV4 465 aaPredicted RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SFTPA2Q8IWL1 248 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR4N4Q8N0Y3 316 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 LNX2Q8N448 690 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 ARL14Q8N4G2 192 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SRFBP1Q8NEF9 429 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR4K14Q8NGD5 310 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR4D9Q8NGE8 314 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR51A7Q8NH64 312 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TRMT10AQ8TBZ6 339 aaKnown RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 OR1E3Q8WZA6 343 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 SNAPC3Q92966 411 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 UBL7Q96S82 380 aaPredicted RBP6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CD180Q99467 661 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 IFT27Q9BW83 186 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TEX12Q9BXU0 123 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 CERS4Q9HA82 394 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 TRIM36Q9NQ86 728 aa6.42□□□□□ -1.38
LINC-ROR-201ENST00000553704 EVA1BQ9NVM1 165 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms