RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ZNF555Q8NEP9 628 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 OR4K5Q8NGD3 323 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 OR5M3Q8NGP4 307 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 RNF138Q8WVD3 245 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 ACOT11Q8WXI4 607 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-206ENST00000553447 KIAA1143Q96AT1 154 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-206ENST00000553447 CNBD2Q96M20 576 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 NIPSNAP1Q9BPW8 284 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 PRSS27Q9BQR3 290 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 ANKRD60Q9BZ19 345 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 LAT2Q9GZY6 243 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 GPN2Q9H9Y4 310 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-206ENST00000553447 ZNF556Q9HAH1 456 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 PAPOLBQ9NRJ5 636 aaKnown RBP16.11■□□□□ 0.17
PSEN1-206ENST00000553447 FAM118AQ9NWS6 357 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 MGAT4BQ9UQ53 548 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 CARD8Q9Y2G2 431 aa16.11■□□□□ 0.17
PSEN1-206ENST00000553447 YARS2Q9Y2Z4 477 aaKnown RBP16.11■□□□□ 0.17
PSEN1-206ENST00000553447 A0A087WUU8 490 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 A0A0B4J2E0 115 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 A0A1B0GWA3 101 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 A0A1B0GX12 115 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 ADAM10O14672 748 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 SCO2O43819 266 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 EIF4E2O60573 245 aaKnown RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 ANGPTL1O95841 491 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 ADAP00813 363 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 SERPINA7P05543 415 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 RYKP34925 604 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 CLK3P49761 638 aaKnown RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 UGT2B15P54855 530 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 MLF1P58340 268 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 ZNF117Q03924 483 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 RTP5Q14D33 572 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 TGIF1Q15583 401 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 NTRK2Q16620 822 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 TTC23Q5W5X9 447 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 CBLN3Q6UW01 205 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 ZNF730Q6ZMV8 503 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 RPS19BP1Q86WX3 136 aaKnown RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 APLFQ8IW19 511 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 TMCO5AQ8N6Q1 288 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 GRHL3Q8TE85 626 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 GTPBP3Q969Y2 492 aaKnown RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 SPACA9Q96E40 222 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 IP6K3Q96PC2 410 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 DGCR6LQ9BY27 220 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 GABARAPL3Q9BY60 117 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 RIBC2Q9H4K1 309 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 CDCP1Q9H5V8 836 aa16.1■□□□□ 0.17
PSEN1-206ENST00000553447 RYDENQ9NUL5 291 aaKnown RBP16.1■□□□□ 0.17
PSEN1-206ENST00000553447 CHP2O43745 196 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 MAN1A2O60476 641 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 NTN1O95631 604 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 RPSAP08865 295 aaKnown RBP16.09■□□□□ 0.17
PSEN1-206ENST00000553447 LIFP15018 202 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 MYF6P23409 242 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 SOX3P41225 446 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 SLC6A8P48029 635 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 PDK3Q15120 406 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 ZNF791Q3KP31 576 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-206ENST00000553447 FCRLBQ6BAA4 426 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 H3F3CQ6NXT2 135 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 C1orf94Q6P1W5 598 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 OPN5Q6U736 354 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 USP51Q70EK9 711 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 MISPQ8IVT2 679 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 CADM2Q8N3J6 435 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 TMEM255BQ8WV15 326 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 RPS6KB2Q9UBS0 482 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
PSEN1-206ENST00000553447 DCDC2BA2VCK2 349 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 SLC16A6O15403 523 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 HCRTR2O43614 444 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 OR6B1O95007 311 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 GNAO1P09471 354 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 LINGO3P0C6S8 592 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 POU2F1P14859 743 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 POLR2IP36954 125 aaKnown RBP16.08■□□□□ 0.16
PSEN1-206ENST00000553447 IFNGR2P38484 337 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 SSR4P51571 173 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 CCR4P51679 360 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 COPZ1P61923 177 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 LSM11P83369 360 aaKnown RBP eCLIP16.08■□□□□ 0.16
PSEN1-206ENST00000553447 KLHL17Q6TDP4 642 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 WDR88Q6ZMY6 472 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 MBOAT2Q6ZWT7 520 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 RRM2BQ7LG56 351 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 PRICKLE2Q7Z3G6 844 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 ZER1Q7Z7L7 766 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 PARP8Q8N3A8 854 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 OR10G3Q8NGC4 313 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 PIGXQ8TBF5 258 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 ASB15Q8WXK1 588 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 SH3YL1Q96HL8 342 aaPredicted RBP16.08■□□□□ 0.16
PSEN1-206ENST00000553447 NR1H4Q96RI1 486 aaPredicted RBP16.08■□□□□ 0.16
PSEN1-206ENST00000553447 GRIP2Q9C0E4 1043 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 UBAP1Q9NZ09 502 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 CPAMD8Q8IZJ3 1885 aa16.08■□□□□ 0.16
PSEN1-206ENST00000553447 EML6Q6ZMW3 1958 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms