RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KRT73Q86Y46 540 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 SPPL2CQ8IUH8 684 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 FAM83FQ8NEG4 500 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 POC1BQ8TC44 478 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 SLC35B4Q969S0 331 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 MIB2Q96AX9 1013 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 GPR137Q96N19 417 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 KCTD14Q9BQ13 255 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 BTBD10Q9BSF8 475 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 PRPF19Q9UMS4 504 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 FLNCQ14315 2725 aa13.47□□□□□ -0.25
MTHFD1-204ENST00000553405 C7orf72A4D263 438 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 NPIPA5E9PKD4 350 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 H3BNH8 94 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 FAAHO00519 579 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 CXCR6O00574 342 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 AP3D1O14617 1153 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 TFECO14948 347 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 TPST2O60704 377 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 PRG2P13727 222 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 NCK1P16333 377 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 DPP4P27487 766 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 GDF1P27539 372 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 GFRA1P56159 465 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 DSCR4P56555 118 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 GANABQ14697 944 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 LARS2Q15031 903 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 PLPPR5Q32ZL2 321 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 EIPR1Q53HC9 387 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 SLC25A53Q5H9E4 307 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 ARMC8Q8IUR7 673 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 SMYD1Q8NB12 490 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 OR4D11Q8NGI4 311 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 OR5W2Q8NH69 310 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 CLPTM1LQ96KA5 538 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 ZNF607Q96SK3 696 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 PINK1Q9BXM7 581 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 CADM1Q9BY67 442 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 DEFB127Q9H1M4 99 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 SLC6A15Q9H2J7 730 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 HHATLQ9HCP6 504 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 MED17Q9NVC6 651 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 SPRR3Q9UBC9 169 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 SEC14L3Q9UDX4 400 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 NPIPA1Q9UND3 350 aa13.46□□□□□ -0.25
MTHFD1-204ENST00000553405 ACOT7O00154 380 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 SYT5O00445 386 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 FRS3O43559 492 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 EFNA2O43921 213 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 SERPINB7O75635 380 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 PDE9AO76083 593 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 LGI1O95970 557 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 HSF1Q00613 529 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 EPS8Q12929 822 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 NPTX1Q15818 432 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 NRF1Q16656 503 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 ZSWIM7Q19AV6 140 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 GLYR1Q49A26 553 aaPredicted RBP13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 NHSL2Q5HYW2 709 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 ASRGL1Q7L266 308 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 YRDCQ86U90 279 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 ARHGDIGQ99819 225 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 SPATA5L1Q9BVQ7 753 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 PCDHAC1Q9H158 963 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 LRMDAQ9H2I8 198 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 GORASP2Q9H8Y8 452 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 B4GALT7Q9UBV7 327 aa13.45□□□□□ -0.26
MTHFD1-204ENST00000553405 MYO18BQ8IUG5 2567 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 A0A087WZY1 265 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 SHISA8B8ZZ34 492 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 GTPBP1O00178 669 aaKnown RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ACOT8O14734 319 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ARPC2O15144 300 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 GSC2O15499 205 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNHIT1O43257 154 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 GMFGO60234 142 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 SUSD5O60279 629 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 HCN1O60741 890 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 SEMA7AO75326 666 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ATP5HO75947 161 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 PDE5AO76074 875 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 FESP07332 822 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 C8BP07358 591 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 GKN3PP0CG01 181 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 EDN3P14138 238 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 PRKCAP17252 672 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 TCN1P20061 433 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 MS4A2Q01362 244 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 TLE1Q04724 770 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 GABPB1Q06547 395 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ELOAQ14241 798 aaKnown RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 SLC10A1Q14973 349 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms