RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 RFX3P48380 749 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 RGS6P49758 472 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 MLLT10P55197 1068 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 FHL1Q13642 323 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 DOC2BQ14184 412 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 TMEM44Q2T9K0 475 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 PGGHGQ32M88 737 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 ARHGAP40Q5TG30 622 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 C1orf189Q5VU69 101 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 SLITRK4Q8IW52 837 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 CYP4Z2PQ8N1L4 340 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 ZNF441Q8N8Z8 693 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 FAM71CQ8NEG0 241 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 OR14A16Q8NHC5 309 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 PFN4Q8NHR9 129 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 DYNC2LI1Q8TCX1 351 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 SLC2A12Q8TD20 617 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 DAZLQ92904 295 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 BPIFA2Q96DR5 249 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 VMP1Q96GC9 406 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 TNFRSF13CQ96RJ3 184 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 MGLLQ99685 303 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 TEX12Q9BXU0 123 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 DPH1Q9BZG8 443 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 OR8D2Q9GZM6 311 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 RACGAP1Q9H0H5 632 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 NXF5Q9H1B4 397 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 ATP13A2Q9NQ11 1180 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 UBQLN4Q9NRR5 601 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 FBXO4Q9UKT5 387 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 SRPK3Q9UPE1 567 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 SIGLEC7Q9Y286 467 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 SLC35A3Q9Y2D2 325 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 CLCA3PQ9Y6N3 262 aa8.63□□□□□ -1.03
MTHFD1-203ENST00000553391 CABIN1Q9Y6J0 2220 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 A0A087WUJ7 227 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 C2orf92A0A1B0GVN3 265 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 HTR3EA5X5Y0 456 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 VSTM2BA6NLU5 285 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OR6C76A6NM76 312 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 SNTNA6NMZ2 147 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 EFCAB9A8MZ26 197 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 BHLHE40O14503 412 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OIP5O43482 229 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 PRKNO60260 465 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 TSPAN2O60636 221 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 CLPXO76031 633 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 CSTAP01040 98 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 RPLP0P05388 317 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 CKMT1AP12532 417 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 GADD45AP24522 165 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ENTPD1P49961 510 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 VBP1P61758 197 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OCA2Q04671 838 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 RAB40BQ12829 278 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 SPHARQ15513 63 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 NSDHLQ15738 373 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ZNF829Q3KNS6 432 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 MINDY4Q4G0A6 757 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 C3orf38Q5JPI3 329 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 CLEC12AQ5QGZ9 265 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ZNF362Q5T0B9 420 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ZNF385CQ66K41 422 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 RPL13AP3Q6NVV1 102 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 SLC30A6Q6NXT4 461 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 SLC23A3Q6PIS1 610 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 KIRREL2Q6UWL6 708 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 APOOLQ6UXV4 268 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OVCH1Q7RTY7 1134 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 BPHLQ86WA6 291 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 SLC43A2Q8N370 569 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 LNX2Q8N448 690 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 DTWD2Q8NBA8 298 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 SLC38A9Q8NBW4 561 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 NFAM1Q8NET5 270 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OR2T33Q8NG76 320 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OR1N1Q8NGS0 311 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 STT3BQ8TCJ2 826 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 DNAJA4Q8WW22 397 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 RPL3LQ92901 407 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 NAT6Q93015 286 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 PTP4A1Q93096 173 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 CLIP3Q96DZ5 547 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 RNFT2Q96EX2 444 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ART5Q96L15 291 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 LMF1Q96S06 567 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ZNF649Q9BS31 505 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 TAPBPLQ9BX59 468 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 PRRG3Q9BZD7 231 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 VN1R1Q9GZP7 353 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 LAT2Q9GZY6 243 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OR52D1Q9H346 318 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 FN3KQ9H479 309 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 ISYNA1Q9NPH2 558 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 EXOSC3Q9NQT5 275 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 TBC1D23Q9NUY8 699 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 TAS2R16Q9NYV7 291 aa8.62□□□□□ -1.03
MTHFD1-203ENST00000553391 OSGIN1Q9UJX0 560 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms