RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 H3BN98 237 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PLD2O14939 933 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 OIP5O43482 229 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 CHP2O43745 196 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 XPNPEP2O43895 674 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF354AO60765 605 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 JMJD7P0C870 316 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 KRT20P35900 424 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 SKP2Q13309 424 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 TOP3AQ13472 1001 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PCOLCEQ15113 449 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 SMN1Q16637 294 aaKnown RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 GLRX5Q86SX6 157 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 SATL1Q86VE3 508 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 KIF18BQ86Y91 864 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 CCDC103Q8IW40 242 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 RNF113BQ8IZP6 322 aaKnown RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 BPIFB6Q8NFQ5 453 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 GRHL3Q8TE85 626 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 TMEM239Q8WW34 195 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF426Q9BUY5 554 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 COL25A1Q9BXS0 654 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 C9orf172C9J069 976 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 DLGAP3O95886 979 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 UBL4AP11441 157 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PTNP21246 168 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 FPR3P25089 353 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 FOXB2Q5VYV0 432 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 SLX4IPQ5VYV7 408 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 CBLN3Q6UW01 205 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 KIRREL2Q6UWL6 708 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 TIPARPQ7Z3E1 657 aaKnown RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF440Q8IYI8 595 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 DEPDC4Q8N2C3 294 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PHOSPHO1Q8TCT1 267 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 LRFN3Q9BTN0 628 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 EXOSC3Q9NQT5 275 aaKnown RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 FAM86C1Q9NVL1 165 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PAK1IP1Q9NWT1 392 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PADI1Q9ULC6 663 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PCDHGA3Q9Y5H0 932 aa17.94■□□□□ 0.46
RBFOX1-215ENST00000553186 PCNX2A6NKB5 2137 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 OR6B1O95007 311 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 HTR1AP08908 422 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 HES3Q5TGS1 186 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 THAP3Q8WTV1 239 aaPredicted RBP17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 DSN1Q9H410 356 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 BLOC1S6Q9UL45 172 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 NPFFR2Q9Y5X5 522 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 HS3ST3B1Q9Y662 390 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 OR6C70A6NIJ9 312 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 ALG1L2C9J202 215 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 M0R129 80 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 EEF1B2P24534 225 aaKnown RBP17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 GPR4P46093 362 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 NRG3P56975 720 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 GABARAPL2P60520 117 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 CDC42P60953 191 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 EIF3IQ13347 325 aaKnown RBP17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 NADK2Q4G0N4 442 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 ALG10BQ5I7T1 473 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 STPG1Q5TH74 334 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 C12orf73Q69YU5 71 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF773Q6PK81 442 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 C6orf15Q6UXA7 325 aaPredicted RBP17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 LINC00114Q6XXX2 140 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 RASSF6Q6ZTQ3 369 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 DEPDC7Q96QD5 511 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 PRRX2Q99811 253 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 PLA2G12AQ9BZM1 189 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 C20orf141Q9NUB4 165 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 CARD8Q9Y2G2 431 aa17.93■□□□□ 0.46
RBFOX1-215ENST00000553186 CCDC187A0A096LP49 1063 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 IGHV1-45A0A0A0MS14 117 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 A0A1W2PQD3 144 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 CDC42EP2O14613 210 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF264O43296 627 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 ALDH3B2P48448 385 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 ULK3Q6PHR2 472 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 CADM2Q8N3J6 435 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 PFN4Q8NHR9 129 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 RNF217Q8TC41 542 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 MPP4Q96JB8 637 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 EGLN3Q9H6Z9 239 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 POLR1BQ9H9Y6 1135 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 ZBTB20Q9HC78 741 aaPredicted RBP17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 MEPEQ9NQ76 525 aaPredicted RBP17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 IMPAD1Q9NX62 359 aa17.92■□□□□ 0.46
RBFOX1-215ENST00000553186 WWP2O00308 870 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 FADS1O60427 444 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 ZFAND5O76080 213 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 NADKO95544 446 aaPredicted RBP17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 LINGO3P0C6S8 592 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 COX6A1P12074 109 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 GIPRP48546 466 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 CDK5Q00535 292 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 OR5L2Q8NGL0 311 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 ELP5Q8TE02 316 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 IMMP1LQ96LU5 166 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF700Q9H0M5 742 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms