RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 OR5W2Q8NH69 310 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 BBS10Q8TAM1 723 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 SLC38A5Q8WUX1 472 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 WDR60Q8WVS4 1066 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ARSGQ96EG1 525 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 WDYHV1Q96HA8 205 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ANKRD27Q96NW4 1050 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 TREX2Q9BQ50 279 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ELAC2Q9BQ52 826 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 LAT2Q9GZY6 243 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 QRSL1Q9H0R6 528 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 IKZF5Q9H5V7 419 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 MTHFD2LQ9H903 347 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 EXOSC3Q9NQT5 275 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 FAM53CQ9NYF3 392 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CAMK2AQ9UQM7 478 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 VDAC3Q9Y277 283 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CARD8Q9Y2G2 431 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 FLNBO75369 2602 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 A0A0G2JPF8 293 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 AHRRA9YTQ3 701 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 HNRNPCL2B2RXH8 293 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 HNRNPCL3B7ZW38 293 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 H0Y3Z8 333 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 FXYD1O00168 92 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 ETV2O00321 342 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 MRASO14807 208 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 HNRNPCL1O60812 293 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 NUDT14O95848 222 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 NPPAP01160 153 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 THBS1P07996 1170 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 LINGO3P0C6S8 592 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 UBTFL6P0CB48 400 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 HNRNPCL4P0DMR1 293 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 PEPDP12955 493 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 NID1P14543 1247 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 POU3F2P20265 443 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 PGM1P36871 562 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 EIF1P41567 113 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 CCR4P51679 360 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 SMSP52788 366 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 PLAURQ03405 335 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 FOXF1Q12946 379 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 CYLC2Q14093 348 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 BCL2A1Q16548 175 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 MMEL1Q495T6 779 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 LIN52Q52LA3 116 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 RUNDC3AQ59EK9 446 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 RNF220Q5VTB9 566 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 RTL6Q6ICC9 239 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 LACC1Q8IV20 430 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 PEX5LQ8IYB4 626 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 RPRMLQ8N4K4 120 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 PCYOX1LQ8NBM8 494 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 ZPLD1Q8TCW7 415 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 GPR119Q8TDV5 335 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 ITLN2Q8WWU7 325 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 KLHDC3Q9BQ90 382 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 TTYH2Q9BSA4 534 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 TMEM38AQ9H6F2 299 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 CACYBPQ9HB71 228 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 BCL2L10Q9HD36 194 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 GPC6Q9Y625 555 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 AP4B1Q9Y6B7 739 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 ADGRG4Q8IZF6 3080 aa10.59□□□□□ -0.71
TRAFD1-209ENST00000552896 C5orf58C9J3I9 102 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 H3BML4 177 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 NTN1O95631 604 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 ETS2P15036 469 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 PGCP20142 388 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 PSMA4P25789 261 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 ADH6P28332 368 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC6A8P48029 635 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 NUP107P57740 925 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 MTPNP58546 118 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 KCNJ10P78508 379 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 CYP51A1Q16850 503 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC25A53Q5H9E4 307 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 RPS26P11Q5JNZ5 115 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 NSUN5P2Q63ZY6 315 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 REEP3Q6NUK4 255 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 XKRXQ6PP77 449 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 NCCRP1Q6ZVX7 275 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 NET1Q7Z628 596 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 ADGRE4PQ86SQ3 457 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 C10orf111Q8N326 155 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 OR8J3Q8NGG0 315 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 NFKBIDQ8NI38 313 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 RP9Q8TA86 221 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 ST8SIA1Q92185 356 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 RND1Q92730 232 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 MAL2Q969L2 176 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 ZG16BQ96DA0 208 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 MRGPRX4Q96LA9 322 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 RNF145Q96MT1 663 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 PSMG3-AS1Q96PY0 264 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 CCDC106Q9BWC9 280 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms