RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 FAM162AQ96A26 154 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 CDRT15Q96T59 188 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF350Q9GZX5 532 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 LIME1Q9H400 295 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 TMEM38AQ9H6F2 299 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 KCNJ16Q9NPI9 418 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 DLL4Q9NR61 685 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 CMTM6Q9NX76 183 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF232Q9UNY5 417 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ACANP16112 2415 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 ABCA2Q9BZC7 2435 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 EML6Q6ZMW3 1958 aa10.37□□□□□ -0.75
TMEM116-218ENST00000552839 PRORSD1PA6NEY8 169 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 NME4O00746 187 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 GNB5O14775 395 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 TFECO14948 347 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF354AO60765 605 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 TNFRSF21O75509 655 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 SNX4O95219 450 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 NUDT14O95848 222 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 IGKV1D-16P01601 117 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 C1QCP02747 245 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 DBIP07108 87 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 CHRM4P08173 479 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 BMP2P12643 396 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 UQCRBP14927 111 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 GCKP35557 465 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 RFC3P40938 356 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 MAP3K8P41279 467 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 GSK3BP49841 420 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 MEOX1P50221 254 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 RNF144AP50876 292 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 MVDP53602 400 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 ATP12AP54707 1039 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 NCALDP61601 193 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 CHRNEQ04844 493 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 FUT5Q11128 374 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 MYBPHQ13203 477 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 SNTA1Q13424 505 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 VMACQ2NL98 169 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 EIPR1Q53HC9 387 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 CMPK2Q5EBM0 449 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 PDZK1Q5T2W1 519 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 TYW3Q6IPR3 259 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 FRRS1Q6ZNA5 592 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 EIF3MQ7L2H7 374 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 OLIG3Q7RTU3 272 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 MDGA2Q7Z553 956 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 ARMC8Q8IUR7 673 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 MISPQ8IVT2 679 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 SLC15A3Q8IY34 581 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 ZZZ3Q8IYH5 903 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 OR52P1PQ8NH57 321 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 PAQR8Q8TEZ7 354 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 HGDQ93099 445 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 NODALQ96S42 347 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 FAM173AQ9BQD7 235 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 GPATCH1Q9BRR8 931 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 THTPAQ9BU02 230 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 KLHL28Q9NXS3 571 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 DNAJB12Q9NXW2 375 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 DKKL1Q9UK85 242 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 PRPF19Q9UMS4 504 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 RPH3AQ9Y2J0 694 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 DTNAQ9Y4J8 743 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 WIF1Q9Y5W5 379 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 GMEB1Q9Y692 573 aa10.36□□□□□ -0.75
TMEM116-218ENST00000552839 CHCHD2Q9Y6H1 151 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 ANKHD1Q8IWZ3 2542 aaKnown RBP10.36□□□□□ -0.75
TMEM116-218ENST00000552839 CXCR6O00574 342 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 PEX1O43933 1283 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 GMFGO60234 142 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 CDC40O60508 579 aaKnown RBP eCLIP10.35□□□□□ -0.75
TMEM116-218ENST00000552839 CIB2O75838 187 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 DNAJC8O75937 253 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-218ENST00000552839 ANGPTL1O95841 491 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 TFPTP0C1Z6 253 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 UBL4AP11441 157 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 CNR1P21554 472 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 TBXA2RP21731 343 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 CASP3P42574 277 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 DNASE1L1P49184 302 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 NUP107P57740 925 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 PMPCAQ10713 525 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 BNIP1Q12981 228 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 BNIP2Q12982 314 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 EMC4Q5J8M3 183 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF311Q5JNZ3 666 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 BICRALQ6AI39 1079 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 LYPD8Q6UX82 237 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 NET1Q7Z628 596 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-218ENST00000552839 HMGN2P46Q86SG4 172 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 ZAR1Q86SH2 424 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 MARCH3Q86UD3 253 aa10.35□□□□□ -0.75
TMEM116-218ENST00000552839 SULF2Q8IWU5 870 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms