RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	FOXJ2	Q9P0K8	574 aa		11.65	□□□□□ -0.54
CACNB3-223	ENST00000552480	RPS6KB2	Q9UBS0	482 aa		11.65	□□□□□ -0.54
CACNB3-223	ENST00000552480	NPFFR2	Q9Y5X5	522 aa		11.65	□□□□□ -0.54
CACNB3-223	ENST00000552480	HS3ST3B1	Q9Y662	390 aa		11.65	□□□□□ -0.54
CACNB3-223	ENST00000552480	ASCC3	Q8N3C0	2202 aa	Known RBP	11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480		A0A087WXM4	84 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480		A6NHS1	94 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	SOCS6	O14544	535 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF264	O43296	627 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	KLF4	O43474	513 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	PIP5K1C	O60331	668 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	FADS1	O60427	444 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	EIF4E2	O60573	245 aa	Known RBP	11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	NTN1	O95631	604 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	CLPTM1	O96005	669 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	FTH1P19	P0C7X4	201 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	SLC6A8	P48029	635 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	HLCS	P50747	726 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	GABARAPL2	P60520	117 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	CDC42	P60953	191 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	CXCR4	P61073	352 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	COPZ1	P61923	177 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TUBA4A	P68366	448 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	LSM11	P83369	360 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TEK	Q02763	1124 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	PTGES3	Q15185	160 aa	Known RBP	11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	BTBD16	Q32M84	506 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	C3orf38	Q5JPI3	329 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	SLX4IP	Q5VYV7	408 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	ULK3	Q6PHR2	472 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	WDR88	Q6ZMY6	472 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	RASSF6	Q6ZTQ3	369 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	NRM	Q8IXM6	262 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	ENTHD1	Q8IYW4	607 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	AMER2	Q8N7J2	671 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	GATS	Q8NAP1	163 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	CNIH3	Q8TBE1	160 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	SLC22A8	Q8TCC7	542 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	FAM46A	Q96IP4	442 aa	Known RBP	11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	IMMP1L	Q96LU5	166 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	CCNL2	Q96S94	520 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	GPA33	Q99795	319 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	DEFB126	Q9BYW3	111 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TBL1XR1	Q9BZK7	514 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	ADNP	Q9H2P0	1102 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	SELENON	Q9NZV5	590 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	BLOC1S6	Q9UL45	172 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TCFL5	Q9UL49	500 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	RNF6	Q9Y252	685 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMEM5	Q9Y2B1	443 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	CARD8	Q9Y2G2	431 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TTC28	Q96AY4	2481 aa		11.64	□□□□□ -0.55
CACNB3-223	ENST00000552480	TRIM64C	A6NLI5	447 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480		H3BN98	237 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	WWP2	O00308	870 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	SLC1A7	O00341	560 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	OIP5	O43482	229 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	OR6B1	O95007	311 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	SOX14	O95416	240 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ANGPTL1	O95841	491 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	LINGO3	P0C6S8	592 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	CCDC159	P0C7I6	412 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ATP6V1B1	P15313	513 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	TCN2	P20062	427 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	CRHBP	P24387	322 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	POU1F1	P28069	291 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	EVI2B	P34910	448 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMED10	P49755	219 aa	Known RBP	11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF117	Q03924	483 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	PRKCD	Q05655	676 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ALG10B	Q5I7T1	473 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	C12orf73	Q69YU5	71 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	PLAG1	Q6DJT9	500 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	DESI1	Q6ICB0	168 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	WBP2NL	Q6ICG8	309 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	KIRREL2	Q6UWL6	708 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	LINC00114	Q6XXX2	140 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	NDUFAF7	Q7L592	441 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	MISP	Q8IVT2	679 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	NLGN4X	Q8N0W4	816 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	CADM2	Q8N3J6	435 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	SLC15A4	Q8N697	577 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMCO5A	Q8N6Q1	288 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	OR11G2	Q8NGC1	345 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	RHOXF1	Q8NHV9	184 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	RNF217	Q8TC41	542 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	THAP3	Q8WTV1	239 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	HGD	Q93099	445 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	TMCO6	Q96DC7	493 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ARSG	Q96EG1	525 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZNF426	Q9BUY5	554 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	FAM117A	Q9C073	453 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	MMP25	Q9NPA2	562 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	IMPAD1	Q9NX62	359 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	CNIH4	Q9P003	139 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	MYOT	Q9UBF9	498 aa		11.63	□□□□□ -0.55
CACNB3-223	ENST00000552480	FARSA	Q9Y285	508 aa	Known RBP	11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms