RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 NHSL2Q5HYW2 709 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 ZNF311Q5JNZ3 666 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 MRPL2Q5T653 305 aaKnown RBP11.9□□□□□ -0.5
CHPT1-207ENST00000552213 VASNQ6EMK4 673 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 HACD2Q6Y1H2 254 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 NET1Q7Z628 596 aaPredicted RBP11.9□□□□□ -0.5
CHPT1-207ENST00000552213 FJX1Q86VR8 437 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 PTOV1Q86YD1 416 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 RP1L1Q8IWN7 2480 aaPredicted RBP11.9□□□□□ -0.5
CHPT1-207ENST00000552213 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 ZZZ3Q8IYH5 903 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 PM20D2Q8IYS1 436 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 EID3Q8N140 333 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 CNOT9Q92600 299 aaKnown RBP11.9□□□□□ -0.5
CHPT1-207ENST00000552213 ZBTB8AQ96BR9 441 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 TIMP4Q99727 224 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 SPATA9Q9BWV2 254 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 TP63Q9H3D4 680 aaPredicted RBP11.9□□□□□ -0.5
CHPT1-207ENST00000552213 CAMK2AQ9UQM7 478 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 SLC5A6Q9Y289 635 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 AP3M1Q9Y2T2 418 aa11.9□□□□□ -0.5
CHPT1-207ENST00000552213 PRRC2CQ9Y520 2896 aaKnown RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 OR2M5A3KFT3 312 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 SHISA8B8ZZ34 492 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 H3BML4 177 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 LINC01387J3KSC0 135 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 BCAS1O75363 584 aaPredicted RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 LINGO3P0C6S8 592 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 PABPC4LP0CB38 370 aaKnown RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 UQCRBP14927 111 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 POU3F2P20265 443 aaPredicted RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 PCGF2P35227 344 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 EIF1P41567 113 aaKnown RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 SLC6A8P48029 635 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 STARP49675 285 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 GFRA1P56159 465 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 MXRA7P84157 204 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 SRYQ05066 204 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 QPRTQ15274 297 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 ZSWIM7Q19AV6 140 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 VMACQ2NL98 169 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 PLPPR5Q32ZL2 321 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 INTS11Q5TA45 600 aaKnown RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 FAM91A1Q658Y4 838 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 GTPBP8Q8N3Z3 284 aaPredicted RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 FITM2Q8N6M3 262 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 FAM71CQ8NEG0 241 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 ZNF563Q8TA94 476 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 GPR119Q8TDV5 335 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 SMPDL3BQ92485 455 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 RELTQ969Z4 430 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 ARSGQ96EG1 525 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 REXO5Q96IC2 774 aaKnown RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 KLHDC3Q9BQ90 382 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 ARL8BQ9NVJ2 186 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 RLIMQ9NVW2 624 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 STOML1Q9UBI4 398 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 SLC13A4Q9UKG4 626 aa11.89□□□□□ -0.51
CHPT1-207ENST00000552213 GPC6Q9Y625 555 aaPredicted RBP11.89□□□□□ -0.51
CHPT1-207ENST00000552213 CDHR4A6H8M9 788 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 PRORSD1PA6NEY8 169 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 CCT8L1PA6NM43 557 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 H0Y3Z8 333 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 WDR1O75083 606 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 PEPDP12955 493 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 GABRA1P14867 456 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ZNF17P17021 662 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ME2P23368 584 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ACVR2AP27037 513 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 MNAT1P51948 309 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 SLC7A2P52569 658 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 PER3P56645 1201 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 B3GALT5-AS1P59052 145 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 PSME3P61289 254 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 EEF1A1P68104 462 aaKnown RBP11.88□□□□□ -0.51
CHPT1-207ENST00000552213 FOXF1Q12946 379 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 KRT72Q14CN4 511 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 SF3B4Q15427 424 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHPT1-207ENST00000552213 TOMM34Q15785 309 aaPredicted RBP11.88□□□□□ -0.51
CHPT1-207ENST00000552213 EMC4Q5J8M3 183 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 DCST1Q5T197 706 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 RNF220Q5VTB9 566 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ERICH5Q6P6B1 374 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 CHMP1BQ7LBR1 199 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ARMC8Q8IUR7 673 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 SLC15A3Q8IY34 581 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ZNF440Q8IYI8 595 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 UBQLNLQ8IYU4 475 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 CLIP4Q8N3C7 705 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 OR2T12Q8NG77 320 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 SLC26A7Q8TE54 656 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 TMEM234Q8WY98 164 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 WDYHV1Q96HA8 205 aa11.88□□□□□ -0.51
CHPT1-207ENST00000552213 ZNF583Q96ND8 569 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms