RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SFTPDP35247 375 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 RFX3P48380 749 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 CARD18P57730 90 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PSPHP78330 225 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 POU4F1Q01851 419 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 CHRNEQ04844 493 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 LGALS3BPQ08380 585 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PPP1R7Q15435 360 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PDCD2Q16342 344 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF239Q16600 458 aaKnown RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 AWAT1Q58HT5 328 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF628Q5EBL2 1059 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 TIMM23BQ5SRD1 257 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PDSS1Q5T2R2 415 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 LIPJQ5W064 366 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF544Q6NX49 715 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 TMEM108Q6UXF1 575 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ESPNLQ6ZVH7 1005 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FCRLAQ7L513 359 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PAGE2Q7Z2X7 111 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PEG10Q86TG7 708 aaKnown RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 TDRPQ86YL5 185 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 TMEM139Q8IV31 216 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 CTAGE4Q8IX94 777 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 GTPBP8Q8N3Z3 284 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ANKS4BQ8N8V4 417 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 OR9A2Q8NGT5 310 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 OR52N5Q8NH56 324 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FBXO27Q8NI29 283 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF675Q8TD23 568 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 RNF128Q8TEB7 428 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF418Q8TF45 676 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FAM216AQ8WUB2 273 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 SLC9A6Q92581 669 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FBXO17Q96EF6 278 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 TSPAN17Q96FV3 270 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 KLHL15Q96M94 604 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 RNF145Q96MT1 663 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF681Q96N22 645 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 SORCS2Q96PQ0 1159 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 C1QTNF6Q9BXI9 259 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 SRXN1Q9BYN0 137 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 TBL1XR1Q9BZK7 514 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 BPESC1Q9GZL8 116 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF696Q9H7X3 374 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FAM120CQ9NX05 1096 aaKnown RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PRSS50Q9UI38 385 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 UTS2RQ9UKP6 389 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PSME2Q9UL46 239 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 MGAT4BQ9UQ53 548 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF281Q9Y2X9 895 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FKBP7Q9Y680 259 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF780BQ9Y6R6 833 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 RYR3Q15413 4870 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 DOCK11Q5JSL3 2073 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 IGLV3-32A0A0A0MS00 114 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 IGHV3-15A0A0B4J1V0 119 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 GOLGA8QA0A0J9YX86 632 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 TMEM238LA0A1B0GVL6 79 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 LOC390937A0A1W2PQ73 354 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 A0A1W2PRB8 838 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 GOLGA8OA6NCC3 632 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 OR5H1A6NKK0 313 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 GOLGA8NF8WBI6 632 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 TRIM77I1YAP6 450 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 GOLGA8RI6L899 631 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 M0R1B8 84 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 AKAP10O43572 662 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 GUCY1B2O75343 617 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 PGM3O95394 542 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 UTS2O95399 124 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 CLDN9O95484 217 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 ESRRBO95718 433 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 IL33O95760 270 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 ANGPTL1O95841 491 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 YES1P07947 543 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 CELA3BP08861 270 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 LTA4HP09960 611 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 FAM153BP0C7A2 387 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 STMN1P16949 149 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 IGHV1-2P23083 117 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 PTAFRP25105 342 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 PSMA4P25789 261 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 APEX1P27695 318 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 APOBEC3AP31941 199 aaPredicted RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 ANP32AP39687 249 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 ARL1P40616 181 aaPredicted RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 OR3A2P47893 321 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 CLK3P49761 638 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF75DP51815 510 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 CDH15P55291 814 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 PSG6Q00889 435 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 C17orf67Q0P5P2 114 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 DLG1Q12959 904 aa4.7□□□□□ -1.66
HOXB3-213ENST00000552000 CSTF3Q12996 717 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 FRG1Q14331 258 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 FASTKD3Q14CZ7 662 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 RNPS1Q15287 305 aaKnown RBP4.7□□□□□ -1.66
HOXB3-213ENST00000552000 DECR1Q16698 335 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms