RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 USP53Q70EK8 1073 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 RRM2BQ7LG56 351 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 SHFQ7M4L6 423 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 LHFPL3Q86UP9 236 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 NRMQ8IXM6 262 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 SAMD14Q8IZD0 417 aaPredicted RBP7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 SLC7A5P1Q8MH63 180 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 LRRC25Q8N386 305 aaPredicted RBP7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 KLHL36Q8N4N3 616 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 SLC16A11Q8NCK7 471 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 OR7G2Q8NG99 324 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 BRIX1Q8TDN6 353 aaKnown RBP7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 ADAMTS15Q8TE58 950 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 ASB12Q8WXK4 309 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 SLC7A6Q92536 515 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 KAT2AQ92830 837 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 TM4SF19Q96DZ7 209 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 SMIM10Q96HG1 83 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 DCLRE1CQ96SD1 692 aaKnown RBP7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 ATF6BQ99941 703 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 MMP28Q9H239 520 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 NLGN3Q9NZ94 848 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 KCMF1Q9P0J7 381 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 CLCA2Q9UQC9 943 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 PCDHGB7Q9Y5F8 929 aa7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 ASCC3Q8N3C0 2202 aaKnown RBP7.52□□□□□ -1.21
RAB3IP-215ENST00000551641 A0A0B4J293 547 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 SHISA3A0PJX4 238 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 OR6C74A6NCV1 312 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 GABRPO00591 440 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CSF2P04141 144 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CHRM5P08912 532 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 FAM157BP0CG42 384 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 MPLP40238 635 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 MLLT3P42568 568 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 KIR2DL3P43628 341 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 GPR4P46093 362 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ARRB1P49407 418 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 EVX1P49640 407 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 HNRNPKP61978 463 aaKnown RBP eCLIP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PPP1CAP62136 330 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 EEF1A1P68104 462 aaKnown RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 BTN3A2P78410 334 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 SPEM2Q0P670 501 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 GPR18Q14330 331 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ZNF836Q6ZNA1 936 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 EID2Q8N6I1 236 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ATP6V1C2Q8NEY4 427 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 OR2T33Q8NG76 320 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 TMEM255BQ8WV15 326 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 DNASE2BQ8WZ79 361 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 RNF170Q96K19 258 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PRSS27Q9BQR3 290 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 LRFN3Q9BTN0 628 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 FN3KQ9H479 309 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 RXFP3Q9NSD7 469 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 TOR4AQ9NXH8 423 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ZNF223Q9UK11 482 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PILRBQ9UKJ0 227 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 FBXO4Q9UKT5 387 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 NTNG1Q9Y2I2 539 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 COLEC10Q9Y6Z7 277 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 NINQ8N4C6 2090 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 RALGAPA1Q6GYQ0 2036 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 KNTC1P50748 2209 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CCDC182A6NF36 153 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CDC42EP2O14613 210 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CASKO14936 926 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PIP5K1CO60331 668 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 HOXC4P09017 264 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PVRP15151 417 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 HLA-DMAP28067 261 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 HOXC5Q00444 222 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 HHEXQ03014 270 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ELOCQ15369 112 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 TBRG1Q3YBR2 411 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ZFP69Q49AA0 526 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PYDC2Q56P42 97 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 LCN1P1Q5VSP4 162 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ZC3H14Q6PJT7 736 aaKnown RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ZNF322Q6U7Q0 402 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 TMEM91Q6ZNR0 172 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ASPGQ86U10 573 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 AMIGO1Q86WK6 493 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 GID4Q8IVV7 300 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 KCT2Q8NC54 265 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 DUSP18Q8NEJ0 188 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 BBS1Q8NFJ9 593 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 FLVCR1-AS1Q8TAF5 88 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CDS1Q92903 461 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ELF4Q99607 663 aaPredicted RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 KCNJ15Q99712 375 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 ZNF350Q9GZX5 532 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 SRMSQ9H3Y6 488 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 RNF121Q9H920 327 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 HINT3Q9NQE9 182 aaKnown RBP7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PTGFRNQ9P2B2 879 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 CPNE7Q9UBL6 633 aa7.51□□□□□ -1.21
RAB3IP-215ENST00000551641 PHF11Q9UIL8 331 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms