RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DNAJC1Q96KC8 554 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 AGAP4Q96P64 663 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IL17FQ96PD4 163 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF385AQ96PM9 386 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CYTH2Q99418 400 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CHP1Q99653 195 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OLFM1Q99784 485 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 EGFL8Q99944 293 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CITED2Q99967 270 aaPredicted RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 FERMT1Q9BQL6 677 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 NEURL2Q9BR09 285 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 FNDC11Q9BVV2 318 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 UCK2Q9BZX2 261 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GBA3Q9H227 469 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SRMSQ9H3Y6 488 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GOLPH3Q9H4A6 298 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ANKZF1Q9H8Y5 726 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CNOT10Q9H9A5 744 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 MRM3Q9HC36 420 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 HHATLQ9HCP6 504 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CHST11Q9NPF2 352 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 EQTNQ9NQ60 294 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CUTCQ9NTM9 273 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IMP3Q9NV31 184 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 NLE1Q9NVX2 485 aaPredicted RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ZNHIT6Q9NWK9 470 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 C1RLQ9NZP8 487 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 HACD3Q9P035 362 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 UVRAGQ9P2Y5 699 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 RNF7Q9UBF6 113 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SLC2A6Q9UGQ3 507 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ANAPC7Q9UJX3 599 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 POU2F3Q9UKI9 436 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TFR2Q9UP52 801 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GRIP1Q9Y3R0 1128 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ALG6Q9Y672 507 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PRKDCP78527 4128 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 RYR3Q15413 4870 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SNRNP200O75643 2136 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 INTS1Q8N201 2190 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CCDC88CQ9P219 2028 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 VWFP04275 2813 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 DNAJC13O75165 2243 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 A0A0G2JMM0 328 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1W2PP11 408 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1W2PPB8 328 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1W2PRS3 328 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ELOVL7A1L3X0 281 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 HYKKA2RU49 373 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CCDC162PA2VCL2 907 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 OR5H15A6NDH6 313 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 KIR3DP1A8MWS1 328 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 IDSB3KWA1 339 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 H0YGG7 62 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CCL21O00585 134 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 DVL1O14640 695 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RASGRF2O14827 1237 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 LIN7AO14910 233 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TO15178 435 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 XRCC3O43542 346 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 SPRY1O43609 319 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 LCMT2O60294 686 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 NME2P1O60361 137 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CST8O60676 142 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 SRPX2O60687 465 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 AP2A2O94973 939 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 WISP3O95389 354 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 SLU7O95391 586 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 PMS2P2O95744 297 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 IGHEP01854 428 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 SERPING1P05155 500 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 HBQ1P09105 142 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CCDC172P0C7W6 258 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 FAM106CPP0CH98 169 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 FCGR1AP12314 374 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CD99P14209 185 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 DAOP14920 347 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 MYOD1P15172 320 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CD1EP15812 388 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 PAX1P15863 534 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF23P17027 643 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 KLK2P20151 261 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CDH3P22223 829 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RPS3P23396 243 aaKnown RBP eCLIP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CEACAM8P31997 349 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CTNNA1P35221 906 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 GP5P40197 560 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CAPZA1P52907 286 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ADARP55265 1226 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TUBA1BP68363 451 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 UBXN1Q04323 297 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TLE4Q04727 773 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 EGR4Q05215 589 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 KLHL30Q0D2K2 578 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 DLG1Q12959 904 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ITGA9Q13797 1035 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 GTF2H2Q13888 395 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 FAM53BQ14153 422 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ITIH4Q14624 930 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 PDK1Q15118 436 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms