RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ICAM5Q9UMF0 924 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.63□□□□□ -0.07
VPS29-207ENST00000549970 DTNAQ9Y4J8 743 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 MTORP42345 2549 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 NPIPB9F8W1W9 429 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 RNASET2O00584 256 aaKnown RBP14.62□□□□□ -0.07
VPS29-207ENST00000549970 SIAH2O43255 324 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 SS18L1O75177 396 aaPredicted RBP14.62□□□□□ -0.07
VPS29-207ENST00000549970 CCR4P51679 360 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 CASP9P55211 416 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 STX3Q13277 289 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 TOMM34Q15785 309 aaPredicted RBP14.62□□□□□ -0.07
VPS29-207ENST00000549970 DEFB113Q30KQ7 82 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 TNFAIP8L3Q5GJ75 292 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 PDZK1Q5T2W1 519 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 ANKRD34AQ69YU3 496 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 OR6K3Q8NGY3 331 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 FBXO27Q8NI29 283 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 OSTF1Q92882 214 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 PCDHGB4Q9UN71 923 aa14.62□□□□□ -0.07
VPS29-207ENST00000549970 DUXAA6NLW8 204 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 DEFB108AA8MXU0 73 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 SNUPNO95149 360 aaKnown RBP14.61□□□□□ -0.07
VPS29-207ENST00000549970 CPSF4O95639 269 aaKnown RBP14.61□□□□□ -0.07
VPS29-207ENST00000549970 KLK2P20151 261 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 ELK4P28324 431 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 SUMO3P55854 103 aaPredicted RBP14.61□□□□□ -0.07
VPS29-207ENST00000549970 CARD18P57730 90 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 GPR68Q15743 365 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 OLIG3Q7RTU3 272 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 ANKRD42Q8N9B4 389 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 ATP6V1C2Q8NEY4 427 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 OR8J2Q8NGG1 315 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 GPR119Q8TDV5 335 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 ROBO4Q8WZ75 1007 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 PIK3IP1Q96FE7 263 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 OR51I1Q9H343 314 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 PLSCR4Q9NRQ2 329 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 PNPOQ9NVS9 261 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 HAO1Q9UJM8 370 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 ACTL7BQ9Y614 415 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 GPC6Q9Y625 555 aaPredicted RBP14.61□□□□□ -0.07
VPS29-207ENST00000549970 HEATR5AQ86XA9 2040 aa14.61□□□□□ -0.07
VPS29-207ENST00000549970 ZNF195O14628 629 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 ZNF264O43296 627 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 EFNA2O43921 213 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 CYP7B1O75881 506 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 AK1P00568 194 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 UBL4AP11441 157 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 PRKCAP17252 672 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 LBPP18428 481 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 CD53P19397 219 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 CRYGSP22914 178 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 ADH6P28332 368 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 ADAM8P78325 824 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 PHC1P78364 1004 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 BST1Q10588 318 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 FOXD4Q12950 439 aaPredicted RBP14.6□□□□□ -0.07
VPS29-207ENST00000549970 ZNF239Q16600 458 aaKnown RBP14.6□□□□□ -0.07
VPS29-207ENST00000549970 TMEM176BQ3YBM2 270 aaPredicted RBP14.6□□□□□ -0.07
VPS29-207ENST00000549970 SPANXN4Q5MJ08 99 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 HHATQ5VTY9 493 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 C22orf34Q6ZV56 151 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 C16orf62Q7Z3J2 963 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 KIRREL3Q8IZU9 778 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 ZNF524Q96C55 264 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 REXO5Q96IC2 774 aaKnown RBP14.6□□□□□ -0.07
VPS29-207ENST00000549970 SRXN1Q9BYN0 137 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 C12orf49Q9H741 205 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 GLRX2Q9NS18 164 aa14.6□□□□□ -0.07
VPS29-207ENST00000549970 CENPVL1A0A0U1RR11 272 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 PRSS51A0A1B0GVH4 220 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 SERINC4A6NH21 518 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 GJE1A6NN92 205 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 ANKRD28O15084 1053 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 FCMRO60667 390 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 SCN2BO60939 215 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 STX11O75558 287 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 TUBBP07437 444 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 AGTR1P30556 359 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 NME5P56597 212 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 CBFBQ13951 182 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 QPRTQ15274 297 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 ARHGAP11BQ3KRB8 267 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 ANXA8L1Q5VT79 327 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 GTF2IRD2BQ6EKJ0 949 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 TNFAIP8L2Q6P589 184 aaPredicted RBP14.59□□□□□ -0.07
VPS29-207ENST00000549970 CROCCP2Q86T23 111 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 GTF2IRD2Q86UP8 949 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 VPS37AQ8NEZ2 397 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 TOR1AIP2Q8NFQ8 470 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 OR5W2Q8NH69 310 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 ZFP90Q8TF47 636 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 ABHD3Q8WU67 409 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 CPNE4Q96A23 557 aaPredicted RBP14.59□□□□□ -0.07
VPS29-207ENST00000549970 TESCQ96BS2 214 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 ARSGQ96EG1 525 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 MRGPRX4Q96LA9 322 aa14.59□□□□□ -0.07
VPS29-207ENST00000549970 NMUR2Q9GZQ4 415 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms