RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
TROAP-211ENST00000549891 CD5LO43866 347 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 PROCP04070 461 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 SLC7A1P30825 629 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 ACVR1BP36896 505 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 RPL3P39023 403 aaKnown RBP12.06□□□□□ -0.48
TROAP-211ENST00000549891 ZNF117Q03924 483 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 BSPH1Q075Z2 132 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 MLC1Q15049 377 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 TSC22D1Q15714 1073 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 TMEM176BQ3YBM2 270 aaPredicted RBP12.06□□□□□ -0.48
TROAP-211ENST00000549891 ZNF385BQ569K4 471 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 CCNJQ5T5M9 372 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 CLEC6AQ6EIG7 209 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 LRIG3Q6UXM1 1119 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 RNF165Q6ZSG1 346 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 Q6ZT83 130 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
TROAP-211ENST00000549891 NUFIP2Q7Z417 695 aaKnown RBP12.06□□□□□ -0.48
TROAP-211ENST00000549891 IFT20Q8IY31 132 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 ZNF619Q8N2I2 560 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 CCDC63Q8NA47 563 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 FBXO27Q8NI29 283 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 PIWIL2Q8TC59 973 aaKnown RBP12.06□□□□□ -0.48
TROAP-211ENST00000549891 ZFP90Q8TF47 636 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 ARL8AQ96BM9 186 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 MUCL1Q96DR8 90 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 C16orf58Q96GQ5 468 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 FCRL1Q96LA6 429 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 SRXN1Q9BYN0 137 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 GRIP2Q9C0E4 1043 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 PIGUQ9H490 435 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 OXSMQ9NWU1 459 aa12.06□□□□□ -0.48
TROAP-211ENST00000549891 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 GTPBP1O00178 669 aaKnown RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 AZIN1O14977 448 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 PLIN3O60664 434 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 HMGN2P05204 90 aaKnown RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 KRT16P08779 473 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 CPA3P15088 417 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 SHC1P29353 583 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 HPCAL1P37235 193 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 RAC3P60763 192 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 RPL38P63173 70 aaKnown RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 FAPQ12884 760 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 SELENBP1Q13228 472 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 NRF1Q16656 503 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 PGGHGQ32M88 737 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 KLHL26Q53HC5 615 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 EXOSC6Q5RKV6 272 aaKnown RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 LIPMQ5VYY2 423 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 HIPK1Q86Z02 1210 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 KBTBD8Q8NFY9 601 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 CLHC1Q8NHS4 586 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 MZB1Q8WU39 189 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 CDS1Q92903 461 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 FAM120BQ96EK7 910 aaKnown RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 OTUB1Q96FW1 271 aaPredicted RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 MRGPRX4Q96LA9 322 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 TRIM2Q9C040 744 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 BCO1Q9HAY6 547 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 TNFRSF12AQ9NP84 129 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 YAE1D1Q9NRH1 226 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 BAIAP2L1Q9UHR4 511 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 MID2Q9UJV3 735 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 ICAM5Q9UMF0 924 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 FAF1Q9UNN5 650 aaPredicted RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 PTGDR2Q9Y5Y4 395 aa12.05□□□□□ -0.48
TROAP-211ENST00000549891 ANK3Q12955 4377 aaKnown RBP12.05□□□□□ -0.48
TROAP-211ENST00000549891 A0A1W2PPM1 405 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 TMEM114B3SHH9 223 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 IGHV4-39P01824 125 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 PRKCAP17252 672 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 OR3A2P47893 321 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 LASP1Q14847 261 aaKnown RBP12.04□□□□□ -0.48
TROAP-211ENST00000549891 PPA1Q15181 289 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 STK11Q15831 433 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 GALNTL6Q49A17 601 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 RFTN2Q52LD8 501 aaPredicted RBP12.04□□□□□ -0.48
TROAP-211ENST00000549891 CDC73Q6P1J9 531 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 CBLN3Q6UW01 205 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 DNM1P46Q6ZS02 220 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 Q6ZSR9 355 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 P2RY8Q86VZ1 359 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 ATP6V1C2Q8NEY4 427 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 TOR1AIP2Q8NFQ8 470 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 OR56A1Q8NGH5 318 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 OR2T11Q8NH01 316 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 ADAMTS15Q8TE58 950 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 NEUROG1Q92886 237 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 RADILQ96JH8 1075 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 KLHDC3Q9BQ90 382 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 RHNO1Q9BSD3 238 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 TRMOQ9BU70 441 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 TRAF4Q9BUZ4 470 aaPredicted RBP12.04□□□□□ -0.48
TROAP-211ENST00000549891 ACTRT3Q9BYD9 372 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 COQ10BQ9H8M1 238 aa12.04□□□□□ -0.48
TROAP-211ENST00000549891 CISD1Q9NZ45 108 aaKnown RBP12.04□□□□□ -0.48
TROAP-211ENST00000549891 CARD8Q9Y2G2 431 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms