RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 HDDC2Q7Z4H3 204 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 UBE2Q1Q7Z7E8 422 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 TPRA1Q86W33 373 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 KREMEN2Q8NCW0 462 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 SFXN5Q8TD22 340 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 NR4A3Q92570 626 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 DDOQ99489 341 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 FAIM2Q9BWQ8 316 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 GSDMCQ9BYG8 508 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 GSX2Q9BZM3 304 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-228ENST00000548938 OR52D1Q9H346 318 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 SLC23A2Q9UGH3 650 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 SLC7A7Q9UM01 511 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 FLVCR2Q9UPI3 526 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 A0A1W2PPV9 198 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 PLPP2O43688 288 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 MT-ND5P03915 603 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 RAB3BP20337 219 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 LCN1P31025 176 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 SLC16A1P53985 500 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 CLDN2P57739 230 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 KIAA1324Q6UXG2 1013 aaKnown RBP12.76□□□□□ -0.37
HDAC7-228ENST00000548938 KANSL1Q7Z3B3 1105 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 PXKQ7Z7A4 578 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 C4orf36Q96KX1 117 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 NDC1Q9BTX1 674 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 DPH1Q9BZG8 443 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 B3GNT4Q9C0J1 378 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 TM7SF3Q9NS93 570 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 HCFC1R1Q9NWW0 138 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 LYARQ9NX58 379 aaKnown RBP12.76□□□□□ -0.37
HDAC7-228ENST00000548938 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
HDAC7-228ENST00000548938 ATG4BQ9Y4P1 393 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 NPTNQ9Y639 398 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 HEATR5BQ9P2D3 2071 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 A0A1W2PR48 441 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 TRABD2BA6NFA1 517 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 LRRN3E7EW58 273 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 J3QLW9 94 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 HOXD4P09016 255 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 C6P13671 934 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF19P17023 458 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 MAP2K6P52564 334 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 RPS7P62081 194 aaKnown RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 SNTB2Q13425 540 aaKnown RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 KLF9Q13886 244 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 HSD17B12Q53GQ0 312 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PRPF38BQ5VTL8 546 aaKnown RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR56A1Q8NGH5 318 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR56B4Q8NH76 319 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 FANK1Q8TC84 345 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 GANCQ8TET4 914 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 WBP1Q96G27 269 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PGLYRP3Q96LB9 341 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 MENTQ9BUN1 341 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 CHIAQ9BZP6 476 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 LRRN3Q9H3W5 708 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 SPHK2Q9NRA0 654 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR6C2Q9NZP2 312 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 FKBP7Q9Y680 259 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 LRIT2A6NDA9 550 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 SC5DO75845 299 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 ACSM4P0C7M7 580 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PDX1P52945 283 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 BLVRAP53004 296 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR12D2P58182 307 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 TSPAN5P62079 268 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 CSNK1G2P78368 415 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 AGERQ15109 404 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 ACSM3Q53FZ2 586 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PRAMEF8Q5VWM4 474 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PRAMEF7Q5VXH5 474 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 C18orf63Q68DL7 685 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 Q6ZTK2 550 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 SRFBP1Q8NEF9 429 aaKnown RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR9A2Q8NGT5 310 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR2T4Q8NH00 348 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 LHFPL5Q8TAF8 219 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF514Q96K75 400 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 TTTY10Q9BZA0 68 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR51V1Q9H2C8 321 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 KLHL28Q9NXS3 571 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 KHNYNO15037 678 aaKnown RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 CCL16O15467 120 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 TSPAN9O75954 239 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 UGT2B7P16662 529 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 RAG2P55895 527 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 TRA2BP62995 288 aaKnown RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PLPP4Q5VZY2 271 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 FCRLBQ6BAA4 426 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 SPRED2Q7Z698 418 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 LINC01555Q8NAE3 123 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms