RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CLDN20P56880 219 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 DSTNP60981 165 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 SKP2Q13309 424 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 FGFBP1Q14512 234 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 MAPK11Q15759 364 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 TOMM34Q15785 309 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 EIF3MQ7L2H7 374 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 MSRB3Q8IXL7 192 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 TMCO5AQ8N6Q1 288 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 C9orf106Q8NAJ2 232 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 OR5W2Q8NH69 310 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 GPR119Q8TDV5 335 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 SMPDL3BQ92485 455 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 RNF145Q96MT1 663 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 LAT2Q9GZY6 243 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 RUBCNLQ9H714 662 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 KCNJ16Q9NPI9 418 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 CLCF1Q9UBD9 225 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 CYP7B1O75881 506 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 TFPTP0C1Z6 253 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 PGM1P36871 562 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 EIF1P41567 113 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 EEFSECP57772 596 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 FOXF1Q12946 379 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 RGNQ15493 299 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 CHMP1BQ7LBR1 199 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 TOR1AIP2Q8NFQ8 470 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 WNT2BQ93097 391 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 ZNF524Q96C55 264 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 ARSGQ96EG1 525 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 MTHFD2LQ9H903 347 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 VAPAQ9P0L0 249 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 P2RX2Q9UBL9 471 aa16.88■□□□□ 0.29
PRPF40B-206ENST00000547764 HEATR5AQ86XA9 2040 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 DOCK7Q96N67 2140 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 AGAP5A6NIR3 686 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 CLDN24A6NM45 220 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 BCAS1O75363 584 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 NUDT7P0C024 238 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 UBTFL6P0CB48 400 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 CCR4P51679 360 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 ZNF136P52737 540 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 RAC1P63000 192 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 KCNJ10P78508 379 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 TFF3Q07654 80 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 CBFBQ13951 182 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 POMZP3Q6PJE2 187 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 GGNQ86UU5 652 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 FAM71CQ8NEG0 241 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 FBXO27Q8NI29 283 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 SLC38A5Q8WUX1 472 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 PMM1Q92871 262 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 ZNF317Q96PQ6 595 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 TM9SF2Q99805 663 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 THUMPD3Q9BV44 507 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 RAD21L1Q9H4I0 556 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 THUMPD1Q9NXG2 353 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 STOML1Q9UBI4 398 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 LEF1Q9UJU2 399 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 GPC6Q9Y625 555 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-206ENST00000547764 TRBV5-3A0A0A0MS03 114 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 EFNA2O43921 213 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 DNAJA2O60884 412 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 TGM6O95932 706 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 OPN1LWP04000 364 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 BCHEP06276 602 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 PRKCAP17252 672 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 IL11P20809 199 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 BMP5P22003 454 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 RPS4Y1P22090 263 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 ADH6P28332 368 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 CRISP3P54108 245 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 PLAURQ03405 335 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 FADDQ13158 208 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 QPRTQ15274 297 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 SLC25A35Q3KQZ1 300 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 DLEU7Q6UYE1 221 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 GRAMD2AQ8IUY3 354 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 METTL25Q8N6Q8 603 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 TSPEARQ8WU66 669 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 PINK1Q9BXM7 581 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 TMEM185BQ9H7F4 350 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 CALML5Q9NZT1 146 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 ZNF629Q9UEG4 869 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 NDUFAF1Q9Y375 327 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 UNC79Q9P2D8 2635 aa16.86■□□□□ 0.29
PRPF40B-206ENST00000547764 CRYBG3Q68DQ2 2970 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 ADGRG4Q8IZF6 3080 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 EIF1AYO14602 144 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 DVL2O14641 736 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 RCBTB2O95199 551 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 SNRPB2P08579 225 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 TMIGD3P0DMS9 266 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 BMP2P12643 396 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 CTSSP25774 331 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 AGFG1P52594 562 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 RPS3AP61247 264 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms