RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 PAMR1Q6UXH9 720 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 GTF2IRD2Q86UP8 949 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 ZNF610Q8N9Z0 462 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 TOR1AIP2Q8NFQ8 470 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 OR6K3Q8NGY3 331 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 GPR119Q8TDV5 335 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 OIT3Q8WWZ8 545 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 OSTF1Q92882 214 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 MBD6Q96DN6 1003 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 ARSGQ96EG1 525 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 SLC35G5Q96KT7 338 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 KLHL15Q96M94 604 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 THAP1Q9NVV9 213 aa16.71■□□□□ 0.27
CHMP1A-203ENST00000547614 ITPR3Q14573 2671 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 GJE1A6NN92 205 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 E9PBE3 544 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 C16orf97H3BN30 126 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF195O14628 629 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 TNFSF11O14788 317 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF264O43296 627 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 OIP5O43482 229 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 SS18L1O75177 396 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ERLIN1O75477 346 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 PLGP00747 810 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 OPN1LWP04000 364 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 PABPC4LP0CB38 370 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 KCNJ5P48544 419 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 CTBP2P56545 445 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 CARD18P57730 90 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 FOXF1Q12946 379 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 SLC25A53Q5H9E4 307 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 HEPHL1Q6MZM0 1159 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 PPP4R4Q6NUP7 873 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 SPATA19Q7Z5L4 167 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 CLEC4FQ8N1N0 589 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF614Q8N883 585 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 OR5W2Q8NH69 310 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 FBXO27Q8NI29 283 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 RAB3IL1Q8TBN0 382 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ZBTB9Q96C00 473 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 MRGPRX4Q96LA9 322 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 WFIKKN1Q96NZ8 548 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF350Q9GZX5 532 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 TMEM185BQ9H7F4 350 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 TIGARQ9NQ88 270 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 ZNF226Q9NYT6 803 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 PLEKHA6Q9Y2H5 1048 aa16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 PRRC2AP48634 2157 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-203ENST00000547614 SERINC4A6NH21 518 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 TRPC5OSA6NMA1 111 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 SLCO1B7G3V0H7 640 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 ETV2O00321 342 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 SDHDO14521 159 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 HDAC3O15379 428 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 EFNA2O43921 213 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 FCMRO60667 390 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 DNAJA2O60884 412 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 SNNO75324 88 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 NTN1O95631 604 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 CPSF4O95639 269 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 RAF1P04049 648 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 UBL4AP11441 157 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 PRKCAP17252 672 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 S100A3P33764 101 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 GPR68Q15743 365 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 FAM174BQ3ZCQ3 159 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 SPANXN4Q5MJ08 99 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 PDZK1Q5T2W1 519 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 ATAD3BQ5T9A4 648 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 SAXO2Q658L1 398 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 C16orf62Q7Z3J2 963 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 ANKRD46Q86W74 232 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 NEURL3Q96EH8 262 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 CCDC115Q96NT0 180 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 ALPK1Q96QP1 1244 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 MED18Q9BUE0 208 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 OR51I1Q9H343 314 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 POLE3Q9NRF9 147 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 AIG1Q9NVV5 245 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 BTNL2Q9UIR0 455 aa16.69■□□□□ 0.26
CHMP1A-203ENST00000547614 ALDOCP09972 364 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 NID1P14543 1247 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 SFTPDP35247 375 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 LRRC74AQ0VAA2 488 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 CBFBQ13951 182 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 TOMM34Q15785 309 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 ATG16L1Q676U5 607 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 XAGE5Q8WWM1 108 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 CPNE4Q96A23 557 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 REXO5Q96IC2 774 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 LAT2Q9GZY6 243 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 SAP130Q9H0E3 1048 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 FANCFQ9NPI8 374 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 KLHL28Q9NXS3 571 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 KCNE5Q9UJ90 142 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 MKLN1Q9UL63 735 aa16.68■□□□□ 0.26
CHMP1A-203ENST00000547614 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 UGT2B17O75795 530 aa16.67■□□□□ 0.26
CHMP1A-203ENST00000547614 OR12D1P0DN82 309 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms