RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZNF221Q9UK13 617 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 CELSR3Q9NYQ7 3312 aa2.84□□□□□ -1.96
SNHG1-224ENST00000545688 A0A0A6YYC8 382 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 NPIPA5A0A0B4J1W7 369 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 NPIPA5E9PKD4 350 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 I3L1I5 382 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 EEF2KO00418 725 aaKnown RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 EI24O14681 340 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 GMNNO75496 209 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 NOL4O94818 638 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 SLC26A2P50443 739 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 LRRC63Q05C16 580 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ANGPT1Q15389 498 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 STXBP2Q15833 593 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 PRR4Q16378 134 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 MEP1BQ16820 701 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ZNF528Q3MIS6 628 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 C12orf60Q5U649 245 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 KCTD11Q693B1 232 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ATRAIDQ6UW56 229 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 MCOLN2Q8IZK6 566 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 CLYBLQ8N0X4 340 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ZNF433Q8N7K0 673 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 SIDT2Q8NBJ9 832 aaKnown RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 SRSF12Q8WXF0 261 aaKnown RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 MARC2Q969Z3 335 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 DYNLL2Q96FJ2 89 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 TSSK1BQ9BXA7 367 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 SLC25A39Q9BZJ4 359 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ZNF331Q9NQX6 463 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ZBED9Q6R2W3 1325 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 TANC1Q9C0D5 1861 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 IGF2RP11717 2491 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 MCM3APO60318 1980 aa2.83□□□□□ -1.96
SNHG1-224ENST00000545688 ATG2AQ2TAZ0 1938 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 MICAL3Q7RTP6 2002 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 FANCMQ8IYD8 2048 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 F5H6K3 240 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 MAGEB4O15481 346 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 NDUFB10O96000 172 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 GHRP10912 638 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 MAT2AP31153 395 aaKnown RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 UGT1A3P35503 534 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 POU3F4P49335 361 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 CAV2P51636 162 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 METAP1P53582 386 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 HERV-K104P63124 156 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 KLRC3Q07444 240 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 BFSP1Q12934 665 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 GK2Q14410 553 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 EXOSC7Q15024 291 aaKnown RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 KBTBD12Q3ZCT8 623 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 CCDC184Q52MB2 194 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 TMEM179BQ7Z7N9 219 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 STHQ8IWL8 128 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 DHTKD1Q96HY7 919 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 Q9H3A6 140 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 DCLRE1BQ9H816 532 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 CYP39A1Q9NYL5 469 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 RAB26Q9ULW5 256 aa2.82□□□□□ -1.96
SNHG1-224ENST00000545688 BARX2Q9UMQ3 279 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 COL11A1P12107 1806 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-224ENST00000545688 DSPP15924 2871 aaKnown RBP2.81□□□□□ -1.96
SNHG1-224ENST00000545688 C11orf98E9PRG8 122 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 WWP2O00308 870 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 MPHOSPH10O00566 681 aaKnown RBP2.81□□□□□ -1.96
SNHG1-224ENST00000545688 LATO43561 262 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 H2AFZP0C0S5 128 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 UBTFL1P0CB47 393 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-224ENST00000545688 VDRP11473 427 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 CCNE1P24864 410 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 ACVR1BP36896 505 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 ACADSBP45954 432 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 LINC00315P59091 139 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 ORC2Q13416 577 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-224ENST00000545688 SMC1AQ14683 1233 aaKnown RBP2.81□□□□□ -1.96
SNHG1-224ENST00000545688 IL34Q6ZMJ4 242 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 C9orf40Q8IXQ3 194 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 MYOCDQ8IZQ8 938 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 GMCL1P1Q8NEA9 526 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 SDR42E1Q8WUS8 393 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 LHX4Q969G2 390 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 IL22RA2Q969J5 263 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 TM2D1Q9BX74 207 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 ACOXLQ9NUZ1 547 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 ASXL3Q9C0F0 2248 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 GCN1Q92616 2671 aaKnown RBP2.81□□□□□ -1.96
SNHG1-224ENST00000545688 NBEAQ8NFP9 2946 aa2.81□□□□□ -1.96
SNHG1-224ENST00000545688 MYH1P12882 1939 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 ADGRA3Q8IWK6 1321 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-224ENST00000545688 OR7A17O14581 309 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 PRKAB2O43741 272 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 DFNA5O60443 496 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 IDH1O75874 414 aaKnown RBP2.8□□□□□ -1.96
SNHG1-224ENST00000545688 GLULP15104 373 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 HOXB8P17481 243 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-224ENST00000545688 CTNNB1P35222 781 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 RBMXP38159 391 aaKnown RBP2.8□□□□□ -1.96
SNHG1-224ENST00000545688 LGSNQ5TDP6 509 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms