RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RIPPLY2Q5TAB7 128 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CHMP1BQ7LBR1 199 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 THAP5Q7Z6K1 395 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 TSPYL5Q86VY4 417 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 ANKRD46Q86W74 232 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 LACC1Q8IV20 430 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CCDC71Q8IV32 467 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CLECL1Q8IZS7 167 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 RPRMLQ8N4K4 120 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 TRIML2Q8N7C3 387 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 FADS6Q8N9I5 356 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 ZNF527Q8NB42 609 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 OR2M3Q8NG83 312 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 OR4C3Q8NH37 302 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 OR5AK3PQ8NH89 298 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 GOT1L1Q8NHS2 421 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 ZPLD1Q8TCW7 415 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CDS1Q92903 461 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 UBE2FQ969M7 185 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 WDYHV1Q96HA8 205 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 MAELQ96JY0 434 aaKnown RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 SLC35G5Q96KT7 338 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 OR7D2Q96RA2 312 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 PIGQQ9BRB3 760 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CALHM2Q9HA72 323 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 KCNJ16Q9NPI9 418 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 INTS9Q9NV88 658 aaKnown RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 EXD2Q9NVH0 621 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 FLRT3Q9NZU0 649 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 MED11Q9P086 117 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 BTNL2Q9UIR0 455 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 RPH3AQ9Y2J0 694 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 GPR45Q9Y5Y3 372 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 USH1CQ9Y6N9 552 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CACNA1DQ01668 2161 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 A0A087WZY1 265 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 IGLV3-32A0A0A0MS00 114 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 A0A0G2JNJ9 132 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 A0A1W2PQD3 144 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 CD8B2A6NJW9 211 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 FAM90A27PA6NNH2 459 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 H0Y3Z8 333 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 H3BS24 57 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 POLR3GO15318 223 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ZIC3O60481 467 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 DIAPH2O60879 1101 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 SCN2BO60939 215 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 STX11O75558 287 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 SLC22A3O75751 556 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 IGHA1P01876 353 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 IL6P05231 212 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 CD3EP07766 207 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 COX6B1P14854 86 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 CHI3L1P36222 383 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ECI1P42126 302 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 GSK3AP49840 483 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ANXA11P50995 505 aaKnown RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ATP12AP54707 1039 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 GFRA1P56159 465 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 EEFSECP57772 596 aaKnown RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 PHC1P78364 1004 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 TXNL4AP83876 142 aaKnown RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 SRYQ05066 204 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 BCL2A1Q16548 175 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 SLC25A35Q3KQZ1 300 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ACSF3Q4G176 576 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 FLYWCH1Q4VC44 716 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 SLC9B1Q4ZJI4 515 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 PDCD4Q53EL6 469 aaKnown RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 DCST2Q5T1A1 773 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ATAD3BQ5T9A4 648 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 RAET1LQ5VY80 246 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 NSUN5P2Q63ZY6 315 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 APOOLQ6UXV4 268 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 MTERF4Q7Z6M4 381 aaKnown RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 GALNT10Q86SR1 603 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 LURAP1LQ8IV03 231 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 C1GALT1C1Q96EU7 318 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 LRRC46Q96FV0 321 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 OTUB1Q96FW1 271 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-224ENST00000544990 CCDC115Q96NT0 180 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 OR52E6Q96RD3 313 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 PANX1Q96RD7 426 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 TRIB1Q96RU8 372 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 SDF2Q99470 211 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 RTN4RQ9BZR6 473 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 FBXO34Q9NWN3 711 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 ZIM2Q9NZV7 527 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 Q9UFV3 132 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 HCFC1P51610 2035 aa6.67□□□□□ -1.34
CPSF7-224ENST00000544990 COL12A1Q99715 3063 aa6.66□□□□□ -1.34
CPSF7-224ENST00000544990 SHISA3A0PJX4 238 aa6.66□□□□□ -1.34
CPSF7-224ENST00000544990 MBD3L4A6NDZ8 208 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-224ENST00000544990 MBD3L3A6NE82 208 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-224ENST00000544990 CCDC154A6NI56 674 aa6.66□□□□□ -1.34
CPSF7-224ENST00000544990 MBD3L5A6NJ08 208 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-224ENST00000544990 GTPBP1O00178 669 aaKnown RBP6.66□□□□□ -1.34
CPSF7-224ENST00000544990 ZNF195O14628 629 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms