RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268		A8MVJ9	347 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	FABP7	O15540	132 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	AIFM1	O95831	613 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	RRAS	P10301	218 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	PRKAR1A	P10644	381 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	BCKDHB	P21953	392 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	ALDH6A1	Q02252	535 aa	Known RBP	13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	ILK	Q13418	452 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	CLEC12A	Q5QGZ9	265 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	METTL11B	Q5VVY1	283 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	GLCCI1	Q86VQ1	547 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	PARG	Q86W56	976 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	VRK2	Q86Y07	508 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	PHC2	Q8IXK0	858 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	ACOT4	Q8N9L9	421 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	KCT2	Q8NC54	265 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	SLC37A3	Q8NCC5	494 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	OR9A2	Q8NGT5	310 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	MS4A6E	Q96DS6	147 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	HSPA12B	Q96MM6	686 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	BBS4	Q96RK4	519 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	HEXA-AS1	Q9H8Q6	139 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	TAS2R7	Q9NYW3	318 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	CNIH4	Q9P003	139 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	CPNE7	Q9UBL6	633 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	P2RX2	Q9UBL9	471 aa		13.95	□□□□□ -0.18
CHFR-223	ENST00000544268	PRICKLE3	O43900	615 aa	Predicted RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	ZIC2	O95409	532 aa	Predicted RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	PDGFB	P01127	241 aa	Predicted RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	PSMA1	P25786	263 aa	Known RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	NDUFS1	P28331	727 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	MC3R	P41968	323 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	CRYBB2	P43320	205 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	MAN2A2	P49641	1150 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	C12orf73	Q69YU5	71 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	HSDL2	Q6YN16	418 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	SLC25A46	Q96AG3	418 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	SORCS2	Q96PQ0	1159 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	GSDMC	Q9BYG8	508 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	PRDM7	Q9NQW5	492 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	NLK	Q9UBE8	527 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	APOBEC3B	Q9UH17	382 aa	Known RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	GMEB2	Q9UKD1	530 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	CHST2	Q9Y4C5	530 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	ASB4	Q9Y574	426 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	FKBP7	Q9Y680	259 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268		A0A1W2PR77	199 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	CLEC2L	P0C7M8	214 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	CD38	P28907	300 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	ETV5	P41161	510 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	GBX2	P52951	348 aa	Predicted RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	GINS1	Q14691	196 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	OR2G6	Q5TZ20	316 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	CASP12	Q6UXS9	341 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	TAF8	Q7Z7C8	310 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	TMEFF1	Q8IYR6	380 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	FBXW5	Q969U6	566 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	UPRT	Q96BW1	309 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	LRR1	Q96L50	414 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	ZNF607	Q96SK3	696 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	WAC	Q9BTA9	647 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	GALNT9	Q9HCQ5	603 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	MRPS30	Q9NP92	439 aa	Known RBP	13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	STUB1	Q9UNE7	303 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	SPAG17	Q6Q759	2223 aa		13.94	□□□□□ -0.18
CHFR-223	ENST00000544268	CEP192	Q8TEP8	1941 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	ARRDC5	A6NEK1	342 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	CPSF4L	A6NMK7	179 aa	Known RBP	13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	FAAH	O00519	579 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	FCMR	O60667	390 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	CH25H	O95992	272 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	IFNA7	P01567	189 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	CTSE	P14091	401 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	ABAT	P80404	500 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	SPHAR	Q15513	63 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	PRRT3	Q5FWE3	981 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	DDI2	Q5TDH0	399 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	TRIQK	Q629K1	86 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	OR4N5	Q8IXE1	308 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	CLDN22	Q8N7P3	220 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	ZFP41	Q8N8Y5	198 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	MORN4	Q8NDC4	146 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	OR8D4	Q8NGM9	314 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	SPACA7	Q96KW9	195 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	KLHL15	Q96M94	604 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	FNDC11	Q9BVV2	318 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	PCED1A	Q9H1Q7	454 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	PIGU	Q9H490	435 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	OR6C2	Q9NZP2	312 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	MGAT4A	Q9UM21	535 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	PCDHGB7	Q9Y5F8	929 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	SH3D21	A4FU49	640 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	HIST1H1T	P22492	207 aa	Predicted RBP	13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	TRHR	P34981	398 aa	Predicted RBP	13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	GPR18	Q14330	331 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	SYT14P1	Q58G82	188 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	TSSK4	Q6SA08	328 aa		13.93	□□□□□ -0.18
CHFR-223	ENST00000544268	ARL6IP6	Q8N6S5	226 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms