RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 FBXO4Q9UKT5 387 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 OTOGLQ3ZCN5 2332 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 LRRTM2O43300 516 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 UTS2O95399 124 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 CELA2AP08217 269 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 SAGP10523 405 aaPredicted RBP12.57□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
HCFC2-202ENST00000544223 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
HCFC2-202ENST00000544223 EMP3P54852 163 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 AQP6Q13520 282 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 FGFBP1Q14512 234 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 TOMM34Q15785 309 aaPredicted RBP12.57□□□□□ -0.4
HCFC2-202ENST00000544223 C12orf73Q69YU5 71 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 STX19Q8N4C7 294 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
HCFC2-202ENST00000544223 MKKSQ9NPJ1 570 aaPredicted RBP12.57□□□□□ -0.4
HCFC2-202ENST00000544223 TBC1D23Q9NUY8 699 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 MMACHCQ9Y4U1 282 aa12.57□□□□□ -0.4
HCFC2-202ENST00000544223 SERINC4A6NH21 518 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF99A8MXY4 864 aaPredicted RBP12.56□□□□□ -0.4
HCFC2-202ENST00000544223 MEN1O00255 615 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 WWP2O00308 870 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 TRMUO75648 421 aaKnown RBP12.56□□□□□ -0.4
HCFC2-202ENST00000544223 HPGDP15428 266 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 LIPAP38571 399 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 DCDP81605 110 aaKnown RBP12.56□□□□□ -0.4
HCFC2-202ENST00000544223 TSPAN31Q12999 210 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 BICRALQ6AI39 1079 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 CARFQ8N187 725 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 DEPDC4Q8N2C3 294 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 CEP76Q8TAP6 659 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 GNPDA2Q8TDQ7 276 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 RORBQ92753 470 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 NACC2Q96BF6 587 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 LCORQ96JN0 433 aaPredicted RBP12.56□□□□□ -0.4
HCFC2-202ENST00000544223 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 RNF167Q9H6Y7 350 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 NDUFA13Q9P0J0 144 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 PRODH2Q9UF12 536 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 A0A1B0GX12 115 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 POLR1CO15160 346 aaPredicted RBP12.56□□□□□ -0.4
HCFC2-202ENST00000544223 SCO2O43819 266 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 AK1P00568 194 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 MST1P26927 711 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 PPICP45877 212 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 CXCR4P61073 352 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 CDK5Q00535 292 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 SPCS2Q15005 226 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 SYT14P1Q58G82 188 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 BPIFA2Q96DR5 249 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 SIGLEC11Q96RL6 698 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 G6PC3Q9BUM1 346 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 VCX3AQ9NNX9 186 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 CLN6Q9NWW5 311 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 EML6Q6ZMW3 1958 aa12.56□□□□□ -0.4
HCFC2-202ENST00000544223 PNMA8CA0A1B0GUJ8 204 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 BLACEA4D250 179 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 C4orf47A7E2U8 309 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 CDK1P06493 297 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 SYPP08247 313 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ANKRD34CP0C6C1 535 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 MSL3P1P0C860 447 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 TCEA1P23193 301 aaKnown RBP12.55□□□□□ -0.4
HCFC2-202ENST00000544223 DCKP27707 260 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ABCD3P28288 659 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 IFNA8P32881 189 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 SLC9A3P48764 834 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 PCYT1AP49585 367 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 VBP1P61758 197 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
HCFC2-202ENST00000544223 KLHL26Q53HC5 615 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 BORAQ6PGQ7 559 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ANKRD37Q7Z713 158 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 OR1N1Q8NGS0 311 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 FKBP10Q96AY3 582 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 SLC46A1Q96NT5 459 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 IMPA2O14732 288 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 TOX3O15405 576 aaPredicted RBP12.55□□□□□ -0.4
HCFC2-202ENST00000544223 KLF4O43474 513 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 JUNBP17275 347 aaPredicted RBP12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF91Q05481 1191 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF141Q15928 474 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
HCFC2-202ENST00000544223 SLC27A4Q6P1M0 643 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF620Q6ZNG0 422 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 MARCH9Q86YJ5 346 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 APCDD1LQ8NCL9 501 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 SPSB2Q99619 263 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 HCAR1Q9BXC0 346 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 HHATLQ9HCP6 504 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 COPS7AQ9UBW8 275 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 SRPK3Q9UPE1 567 aa12.55□□□□□ -0.4
HCFC2-202ENST00000544223 M0R082 166 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 NTN3O00634 580 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms