RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TLE1Q04724 770 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 SOX4Q06945 474 aaPredicted RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 NIPAL3Q6P499 406 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 SLC7A13Q8TCU3 470 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 ITPKCQ96DU7 683 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 NICN1Q9BSH3 213 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 SPATA6Q9NWH7 488 aaPredicted RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 EHFQ9NZC4 300 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 WASH4PA8MWX3 477 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 NXPH3O95157 252 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 OMGP23515 440 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 TATDN3Q17R31 274 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 MANEALQ5VSG8 457 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 ZNF836Q6ZNA1 936 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 COX15Q7KZN9 410 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 OR51D1Q8NGF3 324 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 PLEK2Q9NYT0 353 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 STYXL1Q9Y6J8 313 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 C17orf105B2RV13 164 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 HSPB6O14558 160 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 CD70P32970 193 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 DAP3P51398 398 aaKnown RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 DUSP3P51452 185 aaPredicted RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 EMX1Q04741 257 aaPredicted RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 MTMR14Q8NCE2 650 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 GALNT9Q9HCQ5 603 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 GCH1P30793 250 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 RPS15P62841 145 aaKnown RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 MRPS34P82930 218 aaKnown RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 TANGO2Q6ICL3 276 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 HEPACAM2A8MVW5 462 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 CBX7O95931 251 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 TSFMP43897 325 aaKnown RBP14.53□□□□□ -0.08
CHD4-210ENST00000544040 TNK1Q13470 666 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 SPRED3Q2MJR0 410 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 LYPD4Q6UWN0 246 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 RCE1Q9Y256 329 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 SPATA31D1Q6ZQQ2 1576 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 OR5K4A6NMS3 321 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 PCGF2P35227 344 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 RPS27AP62979 156 aaKnown RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 UBA52P62987 128 aaKnown RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 MOB3CQ70IA8 216 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 ZNF765Q7L2R6 523 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 CHST14Q8NCH0 376 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 INTS14Q96SY0 518 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 OCSTAMPQ9BR26 566 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 TPSD1Q9BZJ3 242 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 HOXD1Q9GZZ0 328 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 FAM234AQ9H0X4 552 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 FBXL2Q9UKC9 423 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 GJE1A6NN92 205 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 SEC14L2O76054 403 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 MAOBP27338 520 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 LTBQ06643 244 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 VASH1Q7L8A9 365 aaPredicted RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 OR5D14Q8NGL3 314 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 MSI2Q96DH6 328 aaKnown RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 SERINC2Q96SA4 455 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 ANKRD34BA5PLL1 514 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 TTLL8A6PVC2 850 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 PROS1P07225 676 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 TIMP2P16035 220 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 RPS5P46782 204 aaKnown RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 PPT1P50897 306 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 METAP1DQ6UB28 335 aaPredicted RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 DCP2Q8IU60 420 aaKnown RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 LRRC15Q8TF66 581 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 MIB2Q96AX9 1013 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 C12orf42Q96LP6 360 aa14.52□□□□□ -0.08
CHD4-210ENST00000544040 METTL17Q9H7H0 456 aaPredicted RBP14.52□□□□□ -0.08
CHD4-210ENST00000544040 RIMS1Q86UR5 1692 aaKnown RBP14.52□□□□□ -0.09
CHD4-210ENST00000544040 PREX1Q8TCU6 1659 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 DOK2O60496 412 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 TNFSF8P32971 234 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 CST6Q15828 149 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 DUSP7Q16829 419 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 NLRP8Q86W28 1048 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 OR4F15Q8NGB8 312 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 LINC01599Q8WXQ3 324 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 RTP3Q9BQQ7 232 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 XYLT2Q9H1B5 865 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 SMLR1H3BR10 107 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 C21orf33P30042 268 aaPredicted RBP14.52□□□□□ -0.09
CHD4-210ENST00000544040 MEF2DQ14814 521 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 SBSNQ6UWP8 590 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 ZNF300Q96RE9 604 aaPredicted RBP14.52□□□□□ -0.09
CHD4-210ENST00000544040 ZNF587Q96SQ5 575 aaPredicted RBP14.52□□□□□ -0.09
CHD4-210ENST00000544040 SLC25A31Q9H0C2 315 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 OLAHQ9NV23 265 aa14.52□□□□□ -0.09
CHD4-210ENST00000544040 EIF4HQ15056 248 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 OR10A5Q9H207 317 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 OR10A2Q9H208 303 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 PATZ1Q9HBE1 687 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 KDM4EB2RXH2 506 aaPredicted RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 ZNF44P15621 663 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 GLO1Q04760 184 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 AAK1Q2M2I8 961 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 C3orf38Q5JPI3 329 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 LRRC18Q8N456 261 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms