RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KLHL28Q9NXS3 571 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DNAJB12Q9NXW2 375 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TAS2R10Q9NYW0 307 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CD300AQ9UGN4 299 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 VDAC3Q9Y277 283 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RPH3AQ9Y2J0 694 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 COL6A6A6NMZ7 2263 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HEATR5AQ86XA9 2040 aa13.16□□□□□ -0.3
TNFRSF1A-216ENST00000543995 UQCRBP14927 111 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NCK1P16333 377 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GGT1P19440 569 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RYKP34925 604 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MSX2P35548 267 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SUMO3P55854 103 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TLE1Q04724 770 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CEACAM7Q14002 265 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 KRTCAP3Q53RY4 240 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 WIPI1Q5MNZ9 446 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RAET1LQ5VY80 246 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GLYATQ6IB77 296 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DHRS4L2Q6PKH6 230 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAM71CQ8NEG0 241 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TAMM41Q96BW9 452 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 BARD1Q99728 777 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PINK1Q9BXM7 581 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLC6A15Q9H2J7 730 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ACKR4Q9NPB9 350 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EXOSC3Q9NQT5 275 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 LIPGQ9Y5X9 500 aa13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-216ENST00000543995 IGSF10Q6WRI0 2623 aa13.15□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TRGV5A0A0B4J1U4 118 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CFAP73A6NFT4 308 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TPST1O60507 370 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PDE5AO76074 875 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 WISP2O76076 250 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LINGO3P0C6S8 592 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GKN3PP0CG01 181 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 EDN3P14138 238 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PGCP20142 388 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GCKP35557 465 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SLC6A8P48029 635 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PLAURQ03405 335 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 DUSP7Q16829 419 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GFRALQ6UXV0 394 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF550Q7Z398 422 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GRAMD2AQ8IUY3 354 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GHDCQ8N2G8 530 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TPD52L3Q96J77 140 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR2B2Q9GZK3 357 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MAGEL2Q9UJ55 1249 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MRPS18CQ9Y3D5 142 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CHST2Q9Y4C5 530 aa13.14□□□□□ -0.31
TNFRSF1A-216ENST00000543995 A0A087WZY1 265 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZIC3O60481 467 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 HCN1O60741 890 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FESP07332 822 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ME2P23368 584 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 KCNJ5P48544 419 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CRYBA2P53672 197 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 HSF1Q00613 529 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 BNIP2Q12982 314 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TOMM34Q15785 309 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PLPPR5Q32ZL2 321 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CYBRD1Q53TN4 286 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ARHGAP11AQ6P4F7 1023 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TRILQ7L0X0 811 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SPPL2CQ8IUH8 684 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR5M1Q8NGP8 315 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GPR119Q8TDV5 335 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PROX1Q92786 737 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZBTB8AQ96BR9 441 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SFXN2Q96NB2 322 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 KLHDC3Q9BQ90 382 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PCDHAC1Q9H158 963 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MED17Q9NVC6 651 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ADPRHL2Q9NX46 363 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SNX13Q9Y5W8 968 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SPENQ96T58 3664 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 A0A1B0GTH9 108 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FRS3O43559 492 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SUSD5O60279 629 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF682O95780 498 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SERPINA1P01009 418 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 IGHG3P01860 377 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 C8BP07358 591 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 IDH2P48735 452 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RGS8P57771 180 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NCALDP61601 193 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 COPZ1P61923 177 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms