RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 TRIM2Q9C040 744 aa20.08■□□□□ 0.81
CDKN3-207ENST00000543789 HOXD1Q9GZZ0 328 aa20.08■□□□□ 0.81
CDKN3-207ENST00000543789 YAE1D1Q9NRH1 226 aa20.08■□□□□ 0.81
CDKN3-207ENST00000543789 DUSP22Q9NRW4 184 aa20.08■□□□□ 0.81
CDKN3-207ENST00000543789 OXSMQ9NWU1 459 aa20.08■□□□□ 0.81
CDKN3-207ENST00000543789 GPC6Q9Y625 555 aaPredicted RBP20.08■□□□□ 0.81
CDKN3-207ENST00000543789 DPRXA6NFQ7 191 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 RNF212BA8MTL3 300 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ZNF814B7Z6K7 855 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 IGHV4-39P01824 125 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 HMGN2P05204 90 aaKnown RBP20.07■□□□□ 0.8
CDKN3-207ENST00000543789 THBS1P07996 1170 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ATP6V1C1P21283 382 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 CCT5P48643 541 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 P2RX1P51575 399 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 KLHL26Q53HC5 615 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 CBLN3Q6UW01 205 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 BHLHA15Q7RTS1 189 aaPredicted RBP20.07■□□□□ 0.8
CDKN3-207ENST00000543789 HIPK1Q86Z02 1210 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ZNF527Q8NB42 609 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ATP6V1C2Q8NEY4 427 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 KBTBD8Q8NFY9 601 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 OR2T11Q8NH01 316 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 CDS1Q92903 461 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 PIGUQ9H490 435 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ALG2Q9H553 416 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ZCCHC3Q9NUD5 404 aaKnown RBP20.07■□□□□ 0.8
CDKN3-207ENST00000543789 GIN1Q9NXP7 522 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 CARD8Q9Y2G2 431 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 ACTL7BQ9Y614 415 aa20.07■□□□□ 0.8
CDKN3-207ENST00000543789 SONP18583 2426 aaKnown RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 H3BNH8 94 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 KIF2AO00139 706 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 AZIN1O14977 448 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 OIP5O43482 229 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 PLIN3O60664 434 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 ADAM11O75078 769 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 NEFHP12036 1026 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 CPA3P15088 417 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 DDX5P17844 614 aaKnown RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 EFNA1P20827 205 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 ENPP1P22413 925 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 SUMO3P55854 103 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 LASP1Q14847 261 aaKnown RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 MLC1Q15049 377 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 PRR14LQ5THK1 2151 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 DNM1P46Q6ZS02 220 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 Q6ZT83 130 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 R3HCC1LQ7Z5L2 792 aaKnown RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 CCDC63Q8NA47 563 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 ZFP90Q8TF47 636 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 MTERF3Q96E29 417 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 HS6ST2Q96MM7 605 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 TRAF4Q9BUZ4 470 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 L2HGDHQ9H9P8 463 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 BCO1Q9HAY6 547 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 BARX1Q9HBU1 254 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 SIRT3Q9NTG7 399 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 CISD1Q9NZ45 108 aaKnown RBP20.06■□□□□ 0.8
CDKN3-207ENST00000543789 KLHL9Q9P2J3 617 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 ICAM5Q9UMF0 924 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 TMED5Q9Y3A6 229 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 FIS1Q9Y3D6 152 aa20.06■□□□□ 0.8
CDKN3-207ENST00000543789 GTPBP1O00178 669 aaKnown RBP20.05■□□□□ 0.8
CDKN3-207ENST00000543789 NDUFS7O75251 213 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 CD8AP01732 235 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 LINC00032P0C843 101 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 CRHR1P34998 444 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 ASMTP46597 345 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 RAC3P60763 192 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 RPL38P63173 70 aaKnown RBP20.05■□□□□ 0.8
CDKN3-207ENST00000543789 TOMM34Q15785 309 aaPredicted RBP20.05■□□□□ 0.8
CDKN3-207ENST00000543789 SEZ6L2Q6UXD5 910 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 RNF165Q6ZSG1 346 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 IFT20Q8IY31 132 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 GPR119Q8TDV5 335 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 MRGPRX4Q96LA9 322 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 GRIP2Q9C0E4 1043 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 TUBB1Q9H4B7 451 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 COQ10BQ9H8M1 238 aa20.05■□□□□ 0.8
CDKN3-207ENST00000543789 IGHV3-15A0A0B4J1V0 119 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 NPIPA5A0A0B4J1W7 369 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 NPIPA7E9PJI5 369 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 RAMP1O60894 148 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 CHEK2O96017 543 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 NPIPA8P0DM63 369 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 PRKCAP17252 672 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 OR3A2P47893 321 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 RNF144AP50876 292 aaPredicted RBP20.04■□□□□ 0.8
CDKN3-207ENST00000543789 STK11Q15831 433 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 LIPMQ5VYY2 423 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 CDC73Q6P1J9 531 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 MUCL1Q96DR8 90 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 CXorf36Q9H7Y0 433 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 FAIMQ9NVQ4 179 aa20.04■□□□□ 0.8
CDKN3-207ENST00000543789 GDF2Q9UK05 429 aaPredicted RBP20.04■□□□□ 0.8
CDKN3-207ENST00000543789 ING1Q9UK53 422 aaPredicted RBP20.04■□□□□ 0.8
CDKN3-207ENST00000543789 STAB1Q9NY15 2570 aa20.03■□□□□ 0.8
CDKN3-207ENST00000543789 LSM1O15116 133 aaKnown RBP20.03■□□□□ 0.8
CDKN3-207ENST00000543789 LYZL6O75951 148 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms