RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 TMEM179BQ7Z7N9 219 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF454Q8N9F8 522 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF565Q8N9K5 539 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 GPR148Q8TDV2 347 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SLC25A44Q96H78 314 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-204ENST00000543473 KATNBL1Q9H079 304 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 IKZF5Q9H5V7 419 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 PRODH2Q9UF12 536 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 SLC6A5Q9Y345 797 aa18.17■□□□□ 0.5
SUDS3-204ENST00000543473 HSD11B1LQ7Z5J1 315 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 PXKQ7Z7A4 578 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 LINC01465Q8N7H1 131 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 DPYSL5Q9BPU6 564 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 RLIMQ9NVW2 624 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 THSD7AQ9UPZ6 1657 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 TRDV1A0A1B0GX56 115 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 UBL3O95164 117 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 UBBP0CG47 229 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 UBCP0CG48 685 aaKnown RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 DBPQ10586 325 aaPredicted RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF529Q6P280 563 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 SFXN4Q6P4A7 337 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 USP51Q70EK9 711 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 PRRG4Q9BZD6 226 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 GSX2Q9BZM3 304 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 NKX2-4Q9H2Z4 354 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 POLHQ9Y253 713 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 I6L893 689 aaPredicted RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 OC90Q02509 493 aaPredicted RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ELAVL3Q14576 367 aaKnown RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 GNMTQ14749 295 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ENTPD8Q5MY95 495 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 FCRLAQ7L513 359 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ELP5Q8TE02 316 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ACTR10Q9NZ32 417 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF736B4DX44 427 aaPredicted RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ATP6V1G2-DDX39BF2Z307 99 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 AGPAT2O15120 278 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 SYPP08247 313 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 PPP3CBP16298 524 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 TGM1P22735 817 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 ELAVL4P26378 380 aaKnown RBP18.16■□□□□ 0.5
SUDS3-204ENST00000543473 MTNR1BP49286 362 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 OR1J4Q8NGS1 313 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 OR13C3Q8NGS6 347 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 RAB7BQ96AH8 199 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 PBDC1Q9BVG4 233 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 GABARAPL1Q9H0R8 117 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 LINC00597Q9H2U6 94 aa18.16■□□□□ 0.5
SUDS3-204ENST00000543473 LAMB1P07942 1786 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 PHYHO14832 338 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 TSPAN15O95858 294 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 SLC19A1P41440 591 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 RHNO1Q9BSD3 238 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 PRTFDC1Q9NRG1 225 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 HRASLS2Q9NWW9 162 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 LHX3Q9UBR4 397 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 EGFP01133 1207 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 CD1EP15812 388 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 TYRP1P17643 537 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 EIF2S3P41091 472 aaKnown RBP18.15■□□□□ 0.5
SUDS3-204ENST00000543473 RPS15AP62244 130 aaKnown RBP18.15■□□□□ 0.5
SUDS3-204ENST00000543473 CBFBQ13951 182 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 TMPRSS9Q7Z410 1059 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 VRK2Q86Y07 508 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 SVBPQ8N300 66 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 JSRP1Q96MG2 331 aaPredicted RBP18.15■□□□□ 0.5
SUDS3-204ENST00000543473 FN3KQ9H479 309 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF334Q9HCZ1 680 aaPredicted RBP18.15■□□□□ 0.5
SUDS3-204ENST00000543473 WASH6PQ9NQA3 447 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 MEGF11A6BM72 1044 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 HHLA1C9JL84 531 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 CAMLGP49069 296 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 CAPZA1P52907 286 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 SNRPGP62308 76 aaKnown RBP18.15■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.15■□□□□ 0.53e-6■■■□□ 15.9
SUDS3-204ENST00000543473 C6orf132Q5T0Z8 1188 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 SIAH3Q8IW03 269 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 NAXEQ8NCW5 288 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 CDCA4Q9BXL8 241 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 B4DGG1 531 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 HRGP04196 525 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 CERS1P27544 350 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 SORDQ00796 357 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 VASH1Q7L8A9 365 aaPredicted RBP18.15■□□□□ 0.5
SUDS3-204ENST00000543473 NANOGP1Q8N7R0 232 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 SAGE1Q9NXZ1 904 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 PPT2Q9UMR5 302 aa18.15■□□□□ 0.5
SUDS3-204ENST00000543473 B4DXG7 233 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 NPC1O15118 1278 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 TUBG1P23258 451 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 BTG1P62324 171 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 DSC1Q08554 894 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 OTUD1Q5VV17 481 aaPredicted RBP18.14■□□□□ 0.49
SUDS3-204ENST00000543473 XAF1Q6GPH4 301 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 ZNF416Q9BWM5 594 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 A0A1W2PP55 124 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 SLC9B1P1A6NJY1 282 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 SNAPINO95295 136 aa18.14■□□□□ 0.49
SUDS3-204ENST00000543473 RAB40ALP0C0E4 278 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms