RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 OR5K3A6NET4 321 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 A6NIZ1 184 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ADAP00813 363 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 IFNA21P01568 189 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ARAFP10398 606 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 IGFBP6P24592 240 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CRABP1P29762 137 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 GRPRP30550 384 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 DLSTP36957 453 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PRKXP51817 358 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 RAP1BP61224 184 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ACTA2P62736 377 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 RAP1AP62834 184 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ACTG2P63267 376 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ADAM15Q13444 863 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MEP1AQ16819 746 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SCGB2B2Q4G0G5 96 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ZMAT1Q5H9K5 638 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 KRBOX4Q5JUW0 171 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR5M10Q6IEU7 315 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ULK3Q6PHR2 472 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CCBE1Q6UXH8 406 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR9K2Q8NGE7 335 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 LILRB4Q8NHJ6 448 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ABHD5Q8WTS1 349 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CCDC107Q8WV48 283 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 INPP5KQ9BT40 448 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 URM1Q9BTM9 101 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MENTQ9BUN1 341 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CRISPLD2Q9H0B8 497 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 QRSL1Q9H0R6 528 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MED28Q9H204 178 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR10A4Q9H209 315 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 WASH6PQ9NQA3 447 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SEC14L4Q9UDX3 406 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 GPR160Q9UJ42 338 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MGAT4AQ9UM21 535 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 STRCP1A6NGW2 1772 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC35F4A4IF30 521 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 CLDN25C9JDP6 229 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 JRKO75564 520 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF432O94892 652 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 AIFM1O95831 613 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 STAG3L2P0CL84 134 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 RD3LP0DJH9 198 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 EDN3P14138 238 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 TNFRSF17Q02223 184 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 CHRNEQ04844 493 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 ST3GAL4Q11206 333 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 PRAMEF20Q5VT98 475 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 C1orf122Q6ZSJ8 110 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 SYT13Q7L8C5 426 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 MMP21Q8N119 569 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 ACBD7Q8N6N7 88 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 ACOT12Q8WYK0 555 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 SPTSSAQ969W0 71 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 RNF125Q96EQ8 232 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 S100A16Q96FQ6 103 aaKnown RBP6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 LRR1Q96L50 414 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 PINK1Q9BXM7 581 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 ENKD1Q9H0I2 346 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 MAGIXQ9H6Y5 334 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM45AQ9NWC5 275 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 MYH15Q9Y2K3 1946 aa6.46□□□□□ -1.37
SRGAP1-206ENST00000543397 A0A0A6YYH2 397 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 A6NJ64 397 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 L7N2F9 121 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF749O43361 778 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SNNO75324 88 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SLITRK5O94991 958 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 LCATP04180 440 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 LHCGRP22888 699 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 DCKP27707 260 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 CSNK1A1P48729 337 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 VAMP2P63027 116 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 PRKCDQ05655 676 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SMAD2Q15796 467 aaKnown RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 HENMT1Q5T8I9 393 aaKnown RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF813Q6ZN06 617 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 FOXRED2Q8IWF2 684 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 OR1J4Q8NGS1 313 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SFXN5Q8TD22 340 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 TXN2Q99757 166 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 WDR83Q9BRX9 315 aaKnown RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 CCM2LQ9NUG4 571 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 POLHQ9Y253 713 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 TEX13DA0A0J9YY54 714 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 PLSCR5A0PG75 271 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 GABRR3A8MPY1 467 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 KLRC4-KLRK1H3BQV0 150 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ORC5O43913 435 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 FUT1P19526 365 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 CTSSP25774 331 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 ACVR1BP36896 505 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 IST1P53990 364 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 HTRA4P83105 476 aaPredicted RBP6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 KCTD11Q693B1 232 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 C16orf54Q6UWD8 224 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 HDHD5Q9BXW7 423 aa6.46□□□□□ -1.38
SRGAP1-206ENST00000543397 SAP130Q9H0E3 1048 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms