RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF730Q6ZMV8 503 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 Q6ZPB1 254 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 TUBA1AQ71U36 451 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 CROCCP3Q8IVE0 287 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ZNF440Q8IYI8 595 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ENTHD1Q8IYW4 607 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 SLC34A3Q8N130 599 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 ZNF614Q8N883 585 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 FAM71CQ8NEG0 241 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 EFHD2Q96C19 240 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 LMF1Q96S06 567 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 PRSS27Q9BQR3 290 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 PLGRKTQ9HBL7 147 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 KRCC1Q9NPI7 259 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
GNE-206ENST00000543356 SLC7A7Q9UM01 511 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 RNF6Q9Y252 685 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 LOXL2Q9Y4K0 774 aa8.59□□□□□ -1.03
GNE-206ENST00000543356 TSPAN2O60636 221 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 LRP3O75074 770 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ANGPTL1O95841 491 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 TP53P04637 393 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 NGFRP08138 427 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 TBXA2RP21731 343 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ACAA2P42765 397 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 OMPP47874 163 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 GSSP48637 474 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 FOXL2P58012 376 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 RPS3AP61247 264 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 CSRP2Q16527 193 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ZNF773Q6PK81 442 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ZNF517Q6ZMY9 492 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 CPEB2Q7Z5Q1 589 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 NKAIN4Q8IVV8 208 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 LSMEM1Q8N8F7 131 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 OR4C3Q8NH37 302 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 CNIH3Q8TBE1 160 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 PMEPA1Q969W9 287 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 VMP1Q96GC9 406 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 LIN37Q96GY3 246 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 WDR77Q9BQA1 342 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 ZPBPQ9BS86 351 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ULBP3Q9BZM4 244 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 TRIM2Q9C040 744 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ADNPQ9H2P0 1102 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 TMEM27Q9HBJ8 222 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 EXOSC3Q9NQT5 275 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 ZNF223Q9UK11 482 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 RALGAPA1Q6GYQ0 2036 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 A0A0B4J2E0 115 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 A0A1B0GX12 115 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 C9J4A7 227 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 H3BSA7 217 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 SCDO00767 359 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 KLF4O43474 513 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 CHP2O43745 196 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 UTS2O95399 124 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 CSTAP01040 98 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 OCM2P0CE71 109 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 OCMP0CE72 109 aaPredicted RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 FPR3P25089 353 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 IL12BP29460 328 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 ALDH3B2P48448 385 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 CDC42P60953 191 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 CSNK2BP67870 215 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 RNF4P78317 190 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 SPEM2Q0P670 501 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 TSPAN31Q12999 210 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 DCAF12Q5T6F0 453 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 SLX4IPQ5VYV7 408 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 PAPD4Q6PIY7 484 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 CCDC81Q6ZN84 652 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 RNF113BQ8IZP6 322 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 APCDD1LQ8NCL9 501 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 OR8K3Q8NH51 312 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 WDR36Q8NI36 951 aaKnown RBP8.58□□□□□ -1.04
GNE-206ENST00000543356 NUBPLQ8TB37 319 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 TMEM255BQ8WV15 326 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 APH1BQ8WW43 257 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 DDA1Q9BW61 102 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 PCDHGA1Q9Y5H4 931 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 NCOR1O75376 2440 aa8.58□□□□□ -1.04
GNE-206ENST00000543356 LOC102723996A0A087X1L8 192 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 IGHV3-20A0A0C4DH32 117 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 MPZL2O60487 215 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 ABCB7O75027 752 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 WBP4O75554 376 aaKnown RBP8.57□□□□□ -1.04
GNE-206ENST00000543356 GABRB1P18505 474 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 KRT20P35900 424 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 NR0B1P51843 470 aaKnown RBP8.57□□□□□ -1.04
GNE-206ENST00000543356 PNLIPRP2P54317 469 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 PLCXD2Q0VAA5 305 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 ISXQ2M1V0 245 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 BROXQ5VW32 411 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 C12orf73Q69YU5 71 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 HSDL2Q6YN16 418 aa8.57□□□□□ -1.04
GNE-206ENST00000543356 USP43Q70EL4 1123 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms