RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 MMADHCQ9H3L0 296 aaPredicted RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 ZDHHC11Q9H8X9 412 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 GORASP2Q9H8Y8 452 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 AGPAT4Q9NRZ5 378 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 KLHL28Q9NXS3 571 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 SLC13A4Q9UKG4 626 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 NTNG1Q9Y2I2 539 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 MRPS18CQ9Y3D5 142 aaKnown RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 SNX13Q9Y5W8 968 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 ANKUB1A6NFN9 424 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 GMFGO60234 142 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 TRAPPC6AO75865 159 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 NUDT14O95848 222 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 HPNP05981 417 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 DPP4P27487 766 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 SRD5A2P31213 254 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 CBFBQ13951 182 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 SLC10A1Q14973 349 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 TOMM20Q15388 145 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 CYBRD1Q53TN4 286 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 SIAH3Q8IW03 269 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 ARSGQ96EG1 525 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 C1GALT1C1Q96EU7 318 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 MUC13Q9H3R2 512 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 EVA1AQ9H8M9 152 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 OLAHQ9NV23 265 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 ADPRHL2Q9NX46 363 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 BAG5Q9UL15 447 aa15.57■□□□□ 0.08
LIG1-204ENST00000542460 GCN1Q92616 2671 aaKnown RBP15.56■□□□□ 0.08
LIG1-204ENST00000542460 CFAP73A6NFT4 308 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 SYT5O00445 386 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 ARPC2O15144 300 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 LGI1O95970 557 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 FESP07332 822 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 CD247P20963 164 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 SLC6A8P48029 635 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 CCR4P51679 360 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 ZNF41P51814 821 aaPredicted RBP15.56■□□□□ 0.08
LIG1-204ENST00000542460 SELENOWP63302 87 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 ZNF324BQ6AW86 544 aaPredicted RBP15.56■□□□□ 0.08
LIG1-204ENST00000542460 ASRGL1Q7L266 308 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 ZNF550Q7Z398 422 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 GPR32P1Q8NGA4 272 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 GPR119Q8TDV5 335 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 LZICQ8WZA0 190 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 RNF145Q96MT1 663 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 BARD1Q99728 777 aaKnown RBP15.56■□□□□ 0.08
LIG1-204ENST00000542460 ACKR4Q9NPB9 350 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 ASF1BQ9NVP2 202 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 ACTR3BQ9P1U1 418 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 DKKL1Q9UK85 242 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 PRDM4Q9UKN5 801 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 SPTA1P02549 2419 aa15.56■□□□□ 0.08
LIG1-204ENST00000542460 A0A087WZY1 265 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 FAM47E-STBD1D6RA91 191 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 NPIPA5E9PKD4 350 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 SUV39H1O43463 412 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 EPPINO95925 133 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 SERPINA1P01009 418 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 PGCP20142 388 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 PRR30Q53SZ7 412 aaPredicted RBP15.55■□□□□ 0.08
LIG1-204ENST00000542460 CMPK2Q5EBM0 449 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 ARSKQ6UWY0 536 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 CBLL1Q75N03 491 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 ULK2Q8IYT8 1036 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 FAM83FQ8NEG4 500 aaPredicted RBP15.55■□□□□ 0.08
LIG1-204ENST00000542460 OR52E4Q8NGH9 312 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 NR4A3Q92570 626 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 PROX1Q92786 737 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 CCDC124Q96CT7 223 aaKnown RBP15.55■□□□□ 0.08
LIG1-204ENST00000542460 ASB9Q96DX5 294 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 DEFB127Q9H1M4 99 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 DCAF13Q9NV06 445 aaKnown RBP15.55■□□□□ 0.08
LIG1-204ENST00000542460 TAS2R10Q9NYW0 307 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 RPS6KA6Q9UK32 745 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 NPIPA1Q9UND3 350 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 CFAP46Q8IYW2 2715 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 NINQ8N4C6 2090 aa15.55■□□□□ 0.08
LIG1-204ENST00000542460 EML6Q6ZMW3 1958 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 ZIC3O60481 467 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 CDC40O60508 579 aaKnown RBP eCLIP15.54■□□□□ 0.08
LIG1-204ENST00000542460 CELA3AP09093 270 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 LINGO3P0C6S8 592 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 GKN3PP0CG01 181 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 UQCRBP14927 111 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 HK1P19367 917 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 MST1P26927 711 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 RYKP34925 604 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 ACAA2P42765 397 aaKnown RBP15.54■□□□□ 0.08
LIG1-204ENST00000542460 MLLT10P55197 1068 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 MS4A2Q01362 244 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 EPS8Q12929 822 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 TRAP1Q12931 704 aaKnown RBP15.54■□□□□ 0.08
LIG1-204ENST00000542460 GLYR1Q49A26 553 aaPredicted RBP15.54■□□□□ 0.08
LIG1-204ENST00000542460 KRTCAP3Q53RY4 240 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 COMTD1Q86VU5 262 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 DHFR2Q86XF0 187 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 EID3Q8N140 333 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 OR14L1PQ8NHC6 308 aa15.54■□□□□ 0.08
LIG1-204ENST00000542460 CPT1CQ8TCG5 803 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms