RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 SPNP16150 400 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 LEG1Q6P5S2 330 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 Q6ZSR6 202 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 SMAP2Q8WU79 429 aaPredicted RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 FOXN4Q96NZ1 517 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 SERINC2Q96SA4 455 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 CNN2Q99439 309 aaKnown RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 THAP7Q9BT49 309 aaPredicted RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 MIA3Q5JRA6 1907 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 OLFM2O95897 454 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 SPARCP09486 303 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 DNASE1P24855 282 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 BSGP35613 385 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 ERVK-25P63136 954 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 CBFBQ13951 182 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 PLK5Q496M5 336 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 TMPRSS9Q7Z410 1059 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 ZNF619Q8N2I2 560 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 OR2L8Q8NGY9 312 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 RLN3Q8WXF3 142 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 THAP4Q8WY91 577 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 OPALINQ96PE5 141 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 DPCDQ9BVM2 203 aaPredicted RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 TEX13CA0A0J9YWL9 993 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 HYKKA2RU49 373 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 RNF13O43567 381 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 CPMP14384 443 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 ITGB8P26012 769 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 TTLL10Q6ZVT0 673 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 SFTPA1Q8IWL2 248 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 C1QTNF2Q9BXJ5 285 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 ALOXE3Q9BYJ1 711 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
GCFC2-211ENST00000541687 APOBEC3BQ9UH17 382 aaKnown RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 DIMT1Q9UNQ2 313 aaKnown RBP13.53□□□□□ -0.24
GCFC2-211ENST00000541687 C13orf42A0A1B0GVH6 325 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 LINC01553A4QN01 128 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 H0YGG7 62 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 EPHA5P54756 1037 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 ARF3P61204 181 aaPredicted RBP13.52□□□□□ -0.24
GCFC2-211ENST00000541687 TRA2BP62995 288 aaKnown RBP13.52□□□□□ -0.24
GCFC2-211ENST00000541687 FGFBP1Q14512 234 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 TRMT12Q53H54 448 aaKnown RBP13.52□□□□□ -0.24
GCFC2-211ENST00000541687 ARHGAP11AQ6P4F7 1023 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 PAQR7Q86WK9 346 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 TM9SF4Q92544 642 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 FYTTD1Q96QD9 318 aaKnown RBP13.52□□□□□ -0.24
GCFC2-211ENST00000541687 SEC61A2Q9H9S3 476 aa13.52□□□□□ -0.24
GCFC2-211ENST00000541687 FARSAQ9Y285 508 aaKnown RBP13.52□□□□□ -0.24
GCFC2-211ENST00000541687 SMLR1H3BR10 107 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 ANXA3P12429 323 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 ACTC1P68032 377 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 ACTA1P68133 377 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 ANKRD54Q6NXT1 300 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 SLC48A1Q6P1K1 146 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 SDR16C5Q8N3Y7 309 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 NANOGP1Q8N7R0 232 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 POGLUT1Q8NBL1 392 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 INO80EQ8NBZ0 244 aaPredicted RBP13.52□□□□□ -0.25
GCFC2-211ENST00000541687 SETD6Q8TBK2 473 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 SLC35B4Q969S0 331 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 MYEF2Q9P2K5 600 aaKnown RBP13.52□□□□□ -0.25
GCFC2-211ENST00000541687 POM121BA6NF01 834 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 TVP23AA6NH52 213 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 PAHP00439 452 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 FUT1P19526 365 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 HNRNPA2B1P22626 353 aaKnown RBP13.52□□□□□ -0.25
GCFC2-211ENST00000541687 ERP29P30040 261 aaKnown RBP13.52□□□□□ -0.25
GCFC2-211ENST00000541687 SOX18P35713 384 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 PITPNBP48739 271 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 GNG2P59768 71 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 KLHL26Q53HC5 615 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 ADAMTSL4Q6UY14 1074 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 QSOX2Q6ZRP7 698 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 GDF7Q7Z4P5 450 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 FRMD1Q8N878 549 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 OR5T3Q8NGG3 340 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 CASTOR1Q8WTX7 329 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 PATE1Q8WXA2 126 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 MS4A6EQ96DS6 147 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 TAPBPLQ9BX59 468 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 SIDT1Q9NXL6 827 aaKnown RBP13.52□□□□□ -0.25
GCFC2-211ENST00000541687 UPB1Q9UBR1 384 aa13.52□□□□□ -0.25
GCFC2-211ENST00000541687 H2AFB2P0C5Z0 115 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 THEGLP0DJG4 465 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CTXN1P60606 82 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CRMP1Q14194 572 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 FBXL6Q8N531 539 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 CCL4L1Q8NHW4 92 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 APH1BQ8WW43 257 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 TNFRSF13CQ96RJ3 184 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 ADAM29Q9UKF5 820 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 ERVK-19Q9WJR5 959 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 KCNE3Q9Y6H6 103 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 ASXL3Q9C0F0 2248 aa13.51□□□□□ -0.25
GCFC2-211ENST00000541687 GABRA5P31644 462 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms