RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 C9orf40Q8IXQ3 194 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ZSCAN1Q8NBB4 408 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FAM83FQ8NEG4 500 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 DEFB124Q8NES8 71 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ZNF420Q8TAQ5 688 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 LCORQ96JN0 433 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 RDH12Q96NR8 316 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 TTYH2Q9BSA4 534 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 NXF5Q9H1B4 397 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 NMNAT1Q9HAN9 279 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 RASSF1Q9NS23 344 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 C19orf25Q9UFG5 118 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 ORC6Q9Y5N6 252 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CFAP54Q96N23 3096 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CCDC187A0A096LP49 1063 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PMS2P1A4D2B8 440 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 SAGE2PA6NJ88 616 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ZSCAN5BA6NJL1 495 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PLD2O14939 933 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 DRD5P21918 477 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CLK1P49759 484 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 RPS3AP61247 264 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 EEF1A1P68104 462 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 HOXC5Q00444 222 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 KCNAB2Q13303 367 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 NCF4Q15080 339 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 EBPQ15125 230 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 DECR1Q16698 335 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FAM209AQ5JX71 171 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FAHD1Q6P587 224 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ZNF773Q6PK81 442 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ZNF517Q6ZMY9 492 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 USP51Q70EK9 711 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 SLC29A4Q7RTT9 530 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 TAGAPQ8N103 731 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 SLC5A8Q8N695 610 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CELF2-AS1Q8N7Q2 184 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ATG16L2Q8NAA4 619 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ADIPOR1Q96A54 375 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 LPAR4Q99677 370 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 DDA1Q9BW61 102 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FAM118AQ9NWS6 357 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 KIF17Q9P2E2 1029 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ACAD8Q9UKU7 415 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 A4GNTQ9UNA3 340 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PRELID1Q9Y255 219 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PTPRZ1P23471 2315 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 TRBV4-1A0A0J9YWV2 114 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FRG2CA6NGY1 282 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 OR6C76A6NM76 312 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 SSX4O60224 188 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 H1F0P07305 194 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 EPHA2P29317 976 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 TTKP33981 857 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 HLCSP50747 726 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 GPR143P51810 404 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 IFITM2Q01629 132 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.01□□□□□ -1.13
THBS3-210ENST00000541576 PDZK1Q5T2W1 519 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 MRPL2Q5T653 305 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 PAPD4Q6PIY7 484 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 TMEM205Q6UW68 189 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PLEKHG7Q6ZR37 379 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 RFPL4BQ6ZWI9 263 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CPEB2Q7Z5Q1 589 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 C8orf59Q8N0T1 100 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 SPARTQ8N0X7 666 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ZNF614Q8N883 585 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 B3GNT7Q8NFL0 401 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PRRC1Q96M27 445 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FEVQ99581 238 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 COQ7Q99807 217 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 MROQ9BYG7 248 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 WWTR1Q9GZV5 400 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 RERGLQ9H628 205 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CTPS2Q9NRF8 586 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PLSCR3Q9NRY6 295 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 C14orf119Q9NWQ9 140 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 ITGB1BP2Q9UKP3 347 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 PCDHGA10Q9Y5H3 936 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8□□□□□ -1.13
THBS3-210ENST00000541576 AP3D1O14617 1153 aa8□□□□□ -1.13
THBS3-210ENST00000541576 IGFBP5P24593 272 aa8□□□□□ -1.13
THBS3-210ENST00000541576 AZGP1P25311 298 aaKnown RBP8□□□□□ -1.13
THBS3-210ENST00000541576 PSMD4P55036 377 aaKnown RBP8□□□□□ -1.13
THBS3-210ENST00000541576 SMIM11AP58511 58 aa8□□□□□ -1.13
THBS3-210ENST00000541576 CAMK2BQ13554 666 aa8□□□□□ -1.13
THBS3-210ENST00000541576 BCL2A1Q16548 175 aa8□□□□□ -1.13
THBS3-210ENST00000541576 MICAQ29983 383 aa8□□□□□ -1.13
THBS3-210ENST00000541576 RFX4Q33E94 735 aa8□□□□□ -1.13
THBS3-210ENST00000541576 CCDC58Q4VC31 144 aa8□□□□□ -1.13
THBS3-210ENST00000541576 DESI1Q6ICB0 168 aa8□□□□□ -1.13
THBS3-210ENST00000541576 LSRQ86X29 649 aaPredicted RBP8□□□□□ -1.13
THBS3-210ENST00000541576 OR10G2Q8NGC3 310 aa8□□□□□ -1.13
THBS3-210ENST00000541576 OR9Q2Q8NGE9 314 aa8□□□□□ -1.13
THBS3-210ENST00000541576 EFHD2Q96C19 240 aaPredicted RBP8□□□□□ -1.13
THBS3-210ENST00000541576 C8orf44Q96CB5 159 aa8□□□□□ -1.13
THBS3-210ENST00000541576 ZNF486Q96H40 463 aaPredicted RBP8□□□□□ -1.13
THBS3-210ENST00000541576 LMF1Q96S06 567 aa8□□□□□ -1.13
THBS3-210ENST00000541576 FNDC11Q9BVV2 318 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms