RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 VRK3Q8IV63 474 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 OR5L1Q8NGL2 311 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 C10orf82Q8WW14 230 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 TMEM169Q96HH4 297 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 NECTIN4Q96NY8 510 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 CNN2Q99439 309 aaKnown RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 THAP7Q9BT49 309 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 ZDHHC6Q9H6R6 413 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ZNF552Q9H707 407 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 MEAF6Q9HAF1 191 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 HEY2Q9UBP5 337 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 FBXO7Q9Y3I1 522 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 KCNMB2Q9Y691 235 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 UBA6A0AVT1 1052 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 C5orf58C9J3I9 102 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 MBTPS2O43462 519 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 IFNA5P01569 189 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 CRYBA1P05813 215 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ITGA4P13612 1032 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 FUT1P19526 365 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ACO1P21399 889 aaKnown RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 CALCRP30988 508 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 GPR12P47775 334 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ARRB1P49407 418 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 CRYBA4P53673 196 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PMPCAQ10713 525 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.79□□□□□ -1.48
LMO3-225ENST00000541295 EXOC3L2Q2M3D2 409 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ATRAIDQ6UW56 229 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 HSD17B13Q7Z5P4 300 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 WDFY1Q8IWB7 410 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 BPIFB6Q8NFQ5 453 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 OR51L1Q8NGJ5 315 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PHF10Q8WUB8 498 aaKnown RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 ZBTB8AQ96BR9 441 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 HPDLQ96IR7 371 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 HARBI1Q96MB7 349 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 SLC30A3Q99726 388 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 DDA1Q9BW61 102 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PCDHAC1Q9H158 963 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 MTHFD2LQ9H903 347 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 STOX2Q9P2F5 926 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 IKZF3Q9UKT9 509 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PPIEQ9UNP9 301 aaKnown RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 ANGPT4Q9Y264 503 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PTRH2Q9Y3E5 179 aaKnown RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 PCDHA9Q9Y5H5 950 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 NPTNQ9Y639 398 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 BTNL10A8MVZ5 291 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 I6L893 689 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 M0R036 132 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 AIPO00170 330 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 LALBAP00709 142 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 BPIP17213 487 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 IGFBP4P22692 258 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 LHCGRP22888 699 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 CASRP41180 1078 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 GIPRP48546 466 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ATP5J2P56134 94 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 EEFSECP57772 596 aaKnown RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 MVKQ03426 396 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 SPOCK1Q08629 439 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 FGFBP1Q14512 234 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 AKR1C8PQ5T2L2 129 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 LGSNQ5TDP6 509 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PNCKQ6P2M8 343 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 TMEM220Q6QAJ8 160 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 DLEU7Q6UYE1 221 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ZNF562Q6V9R5 426 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 SVBPQ8N300 66 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 LINC01465Q8N7H1 131 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 RASGEF1AQ8N9B8 481 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 EXD3Q8N9H8 876 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 UBAC2Q8NBM4 344 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 OR5K1Q8NHB7 308 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 UBTD2Q8WUN7 234 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ALG3Q92685 438 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 C4orf36Q96KX1 117 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 CAPNS2Q96L46 248 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 TMEM56Q96MV1 263 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 TECTBQ96PL2 329 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ALKBH3Q96Q83 286 aaPredicted RBP5.79□□□□□ -1.48
LMO3-225ENST00000541295 IL22Q9GZX6 179 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 PTGES2Q9H7Z7 377 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 TMEM56-RWDD3S4R434 201 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 ZSWIM8A7E2V4 1837 aa5.79□□□□□ -1.48
LMO3-225ENST00000541295 TRBV11-1A0A0K0K1C0 115 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 EDF1O60869 148 aaKnown RBP5.78□□□□□ -1.48
LMO3-225ENST00000541295 SNAPC5O75971 98 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 B3GAT3O94766 335 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 C6orf47O95873 294 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 SLC35E2BP0CK96 405 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 SLC35E2P0CK97 266 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 SCGB1A1P11684 91 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 TNFRSF1AP19438 455 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 E2F1Q01094 437 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 SLC35F1Q5T1Q4 408 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 PRAMEF8Q5VWM4 474 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 PRAMEF7Q5VXH5 474 aa5.78□□□□□ -1.48
LMO3-225ENST00000541295 SMARCD3Q6STE5 483 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms