RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 OR2L8Q8NGY9 312 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 HASPINQ8TF76 798 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 ACOT12Q8WYK0 555 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 MRGPRX4Q96LA9 322 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 MTERF1Q99551 399 aaKnown RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 GINS4Q9BRT9 223 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 FUZQ9BT04 418 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 OR10A4Q9H209 315 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 UQCC1Q9NVA1 299 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 FNDC3AQ9Y2H6 1198 aaKnown RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 NINQ8N4C6 2090 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 MYADML2A6NDP7 307 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 H3BRB1 525 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 SULT2B1O00204 365 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 EMC8O43402 210 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 MOSPD3O75425 235 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 NXPH2O95156 264 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 WISP3O95389 354 aaPredicted RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 AK1P00568 194 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 PLGP00747 810 aaPredicted RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 GUSBP08236 651 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 GSTP1P09211 210 aaKnown RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 HSD3B1P14060 373 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 HLA-DPA1P20036 260 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 H2BFSP57053 126 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 SNTB2Q13425 540 aaKnown RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 PTGR1Q14914 329 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 OR4D1Q15615 310 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 ZNF630Q2M218 657 aaPredicted RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 DPPA4Q7L190 304 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 TIPARPQ7Z3E1 657 aaKnown RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 C5orf24Q7Z6I8 188 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 TPRA1Q86W33 373 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 CBARPQ8N350 705 aaPredicted RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 CPXM2Q8N436 756 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 OR4A4PQ8NGN8 299 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 PRR7Q8TB68 274 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 UBA3Q8TBC4 463 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 NEK7Q8TDX7 302 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 PHYHIPQ92561 330 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 TM4SF18Q96CE8 201 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 CPNE2Q96FN4 548 aaPredicted RBP8.83□□□□□ -1
CLIP1-214ENST00000540539 C7orf34Q96L11 122 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 ZNF75AQ96N20 296 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 TAAR9Q96RI9 348 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 COLEC11Q9BWP8 271 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 CERS4Q9HA82 394 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 SERHLQ9NQF3 203 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 CTPS2Q9NRF8 586 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 SPG21Q9NZD8 308 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 CHRNA9Q9UGM1 479 aa8.83□□□□□ -1
CLIP1-214ENST00000540539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 A0A1W2PPH5 198 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ZNF726A6NNF4 738 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 TNFRSF11BO00300 401 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 EFSO43281 561 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 MPZL2O60487 215 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 MSCO60682 206 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ITGA5P08648 1049 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 UROSP10746 265 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 CD46P15529 392 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 GABRR2P28476 465 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 RPL3P39023 403 aaKnown RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 RPIAP49247 311 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 LUMP51884 338 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 CDKN2DP55273 166 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 SLC26A5P58743 744 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 SLC14A1Q13336 389 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 IDNKQ5T6J7 187 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 HECTD2Q5U5R9 776 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 SFRP4Q6FHJ7 346 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 ADAM5Q6NVV9 412 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 CD200R1LQ6Q8B3 271 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 GLDNQ6ZMI3 551 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 NR2C2APQ86WQ0 139 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 PTOV1Q86YD1 416 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 OR13C3Q8NGS6 347 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 NEIL3Q8TAT5 605 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 RNASE8Q8TDE3 154 aaKnown RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 RFKQ969G6 155 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ISOC2Q96AB3 205 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 DDA1Q9BW61 102 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 RAI2Q9Y5P3 530 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ALPK3Q96L96 1907 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 EVPLQ92817 2033 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 MYLKQ15746 1914 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 OR2AT4A6NND4 320 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ARPC1BO15143 372 aaKnown RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 F10P00742 488 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 SFTPBP07988 381 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 GABRA5P31644 462 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 IRS1P35568 1242 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 DGKEP52429 567 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ABHD18Q0P651 414 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 HNF4GQ14541 408 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 INSL4Q14641 139 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 TMEM201Q5SNT2 666 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 C1orf185Q5T7R7 199 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms