RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 EXOSC7Q15024 291 aaKnown RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SMN1Q16637 294 aaKnown RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 DEFB109BQ30KR1 87 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 TMEM201Q5SNT2 666 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 FAM199XQ6PEV8 388 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 CASP12Q6UXS9 341 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ZNF836Q6ZNA1 936 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 Q6ZPB1 254 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 WDR53Q7Z5U6 358 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ANKRD13BQ86YJ7 626 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 CLIP4Q8N3C7 705 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 PIGXQ8TBF5 258 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ACOT11Q8WXI4 607 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SGCDQ92629 289 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 UBE2FQ969M7 185 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SLC35B4Q969S0 331 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 PEX11GQ96HA9 241 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 COG8Q96MW5 612 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 OR1F2PQ96R84 312 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SIGLEC11Q96RL6 698 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 TEX12Q9BXU0 123 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 PRRG3Q9BZD7 231 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ACOT13Q9NPJ3 140 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 NINQ8N4C6 2090 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 OR2B3O76000 313 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 MED26O95402 600 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 KLK3P07288 261 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 CTSBP07858 339 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 PIPP12273 146 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 S1PR1P21453 382 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 FUT4P22083 530 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 MMP11P24347 488 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SMSP52788 366 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 PIGFQ07326 219 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 CDC20Q12834 499 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 GPR68Q15743 365 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 TBCEQ15813 527 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SLC25A30Q5SVS4 291 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ATP1A1-AS1Q5TC04 95 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 UBE2UQ5VVX9 321 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ZNF730Q6ZMV8 503 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 AHSA2Q719I0 299 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 ZER1Q7Z7L7 766 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 STX19Q8N4C7 294 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 OR7G1Q8NGA0 311 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 OR8J1Q8NGP2 316 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 OR51Q1Q8NH59 317 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 GGHQ92820 318 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 G6PC3Q9BUM1 346 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SLC7A5P2Q9GIP4 190 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SPRTNQ9H040 489 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 FOLH1BQ9HBA9 442 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 CUTCQ9NTM9 273 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 PRODH2Q9UF12 536 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 SERTAD3Q9UJW9 196 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 CHST2Q9Y4C5 530 aa11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 HEMK1Q9Y5R4 338 aaPredicted RBP11.03□□□□□ -0.64
CYB561A3-215ENST00000540317 GCN1Q92616 2671 aaKnown RBP11.02□□□□□ -0.64
CYB561A3-215ENST00000540317 COL6A6A6NMZ7 2263 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 SPTA1P02549 2419 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 A0A087WUU8 490 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 TRAPPC13A5PLN9 417 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 CPSF4LA6NMK7 179 aaKnown RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 DYRK3O43781 588 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 CPNE3O75131 537 aaKnown RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 ACVR2AP27037 513 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 PCSK6P29122 969 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 TRHRP34981 398 aaPredicted RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 GSSP48637 474 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 EMDP50402 254 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 GP2P55259 537 aaKnown RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 FUT7Q11130 342 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 DNASE1L3Q13609 305 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 OCLNQ16625 522 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 MEDAGQ5VYS4 303 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 RASSF6Q6ZTQ3 369 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 PRICKLE2Q7Z3G6 844 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 GRAMD2AQ8IUY3 354 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 CCDC103Q8IW40 242 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 GPR135Q8IZ08 494 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 RNF113BQ8IZP6 322 aaKnown RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 SIMC1Q8NDZ2 872 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 CT55Q8WUE5 264 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 PIK3R3Q92569 461 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 MR1Q95460 341 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 CLIP3Q96DZ5 547 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 SLC41A3Q96GZ6 507 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 FUNDC2Q9BWH2 189 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 SLC25A19Q9HC21 320 aa11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.02□□□□□ -0.65
CYB561A3-215ENST00000540317 AASSQ9UDR5 926 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms