RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 IGHV1OR15-9A0A0B4J2B8 117 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 K7ESF4 209 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 GTPBP1O00178 669 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 TO15178 435 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CASC3O15234 703 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 WISP3O95389 354 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 OLFM2O95897 454 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 PAK4O96013 591 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 CPEP16870 476 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 HTR2AP28223 471 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 HOXD9P28356 352 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 PPP2R1BP30154 601 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CLEC12AQ5QGZ9 265 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 AVPI1Q5T686 147 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 GPRC6AQ5T6X5 926 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 HACD4Q5VWC8 232 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 MAMSTRQ6ZN01 415 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 OVCH2Q7RTZ1 564 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 KLBQ86Z14 1044 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 GPR135Q8IZ08 494 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZSCAN1Q8NBB4 408 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 GPR26Q8NDV2 337 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 PXT1Q8NFP0 134 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 MYEOVQ96EZ4 313 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 MED18Q9BUE0 208 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 TAPBPLQ9BX59 468 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 PITHD1Q9GZP4 211 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 PRSS16Q9NQE7 514 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 C14orf105Q9NVL8 296 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 WSB2Q9NYS7 404 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 IL17CQ9P0M4 197 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 RASD1Q9Y272 281 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 MED16Q9Y2X0 877 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 LAMA3Q16787 3333 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ANXA2P2A6NMY6 339 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZAR1LA6NP61 321 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 GABRPO00591 440 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ARPC1BO15143 372 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 PCDH7O60245 1069 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 PRMT3O60678 531 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ITGA10O75578 1167 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 IFNA4P05014 189 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 LPLP06858 475 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CEACAM1P13688 526 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 PRG2P13727 222 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CBR1P16152 277 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 HK1P19367 917 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 S100PP25815 95 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 SPAM1P38567 509 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 DEFA6Q01524 100 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CAMK2DQ13557 499 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 HLA-BQ31612 363 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZNF791Q3KP31 576 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 ERN2Q76MJ5 926 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 RNF175Q8N4F7 328 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZNF614Q8N883 585 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 BVESQ8NE79 360 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CADM4Q8NFZ8 388 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 OR4K1Q8NGD4 311 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 NSMAFQ92636 917 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 WBP2Q969T9 261 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 KLHL15Q96M94 604 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 TBX5Q99593 518 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 TCEAL7Q9BRU2 100 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZNF471Q9BX82 626 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 DPEP2Q9H4A9 486 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 C6orf106Q9H6K1 298 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 PPP1R3EQ9H7J1 279 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 CTPS2Q9NRF8 586 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 OR10H1Q9Y4A9 318 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 FAM227AF5H4B4 570 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 PRAMEF26H0Y7S4 382 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 KLK8O60259 260 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 LCMT2O60294 686 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 CH25HO95992 272 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 FAUP35544 74 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 ETV5P41161 510 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 FABP5Q01469 135 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 NFATC2Q13469 925 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 NAE1Q13564 534 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 KIAA0040Q15053 153 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZNF630Q2M218 657 aaPredicted RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 LYPLAL1Q5VWZ2 237 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZNF425Q6IV72 752 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 OR52I1Q8NGK6 324 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 OR5J2Q8NH18 312 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 C7orf34Q96L11 122 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ZNF607Q96SK3 696 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 WRAP53Q9BUR4 548 aaKnown RBP8.12□□□□□ -1.11
DDB1-217ENST00000540166 POLE3Q9NRF9 147 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ACSL6Q9UKU0 697 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 MIA3Q5JRA6 1907 aa8.12□□□□□ -1.11
DDB1-217ENST00000540166 TRDV1A0A1B0GX56 115 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 LNP1A1A4G5 178 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 ZNF879B4DU55 563 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 QSOX1O00391 747 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms