RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RP2O75695 350 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 UBXN7O94888 489 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 CRYZL1O95825 349 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 CEACAM5P06731 702 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 DRD2P14416 443 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 CERS1P27544 350 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 MASP1P48740 699 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 PTH2RP49190 550 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 MRPS21P82921 87 aaKnown RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 C1orf61Q13536 156 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 DUSP7Q16829 419 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ALG10BQ5I7T1 473 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 IRAK1BP1Q5VVH5 260 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 KDM4DQ6B0I6 523 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 LRFN4Q6PJG9 635 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF227Q86WZ6 799 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 LRRC25Q8N386 305 aaPredicted RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ELMOD3Q96FG2 381 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 WDR92Q96MX6 357 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 FYTTD1Q96QD9 318 aaKnown RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SLC7A7Q9UM01 511 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ALG5Q9Y673 324 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF106Q9H2Y7 1883 aaKnown RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PRSS38A1L453 326 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 SPARCP09486 303 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 GPX2P18283 190 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PITPNBP48739 271 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PRKCDQ05655 676 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ELP2Q6IA86 826 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF852Q6ZMS4 543 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 MS4A15Q8N5U1 240 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 SETD6Q8TBK2 473 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 FAM3CQ92520 227 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM41AQ96HV5 264 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 MRGPRX1Q96LB2 322 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 MBOAT4Q96T53 435 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 GABRG3Q99928 467 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 DPYSL5Q9BPU6 564 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PELI2Q9HAT8 420 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 COPS7AQ9UBW8 275 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 GXYLT2A0PJZ3 443 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 H0Y8X5 98 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 SMLR1H3BR10 107 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 WRBO00258 174 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 OR7A10O76100 309 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PPP1R3DO95685 299 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 RPS19P39019 145 aaKnown RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 RAE1P78406 368 aaKnown RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PYCR3Q53H96 274 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF767PQ75MW2 155 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ASPGQ86U10 573 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 BOLLQ8N9W6 283 aaKnown RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 OR52E1Q8NGJ3 308 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 JSRP1Q96MG2 331 aaPredicted RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ATG5Q9H1Y0 275 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 MVB12BQ9H7P6 319 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 OR6C2Q9NZP2 312 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PCDHGA6Q9Y5G7 932 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 METTL21EPA6NDL7 271 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 C2CD4DB7Z1M9 353 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 H7C2Y5 167 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 PSMB10P40306 273 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 SLC6A9P48067 706 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 S100A10P60903 97 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 CD300CQ08708 224 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF761Q86XN6 746 aaPredicted RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ACOT12Q8WYK0 555 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 IL21RQ9HBE5 538 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 SLC39A1Q9NY26 324 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
TRAF1-202ENST00000540010 KLK4Q9Y5K2 254 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 SNX11Q9Y5W9 270 aa9.33□□□□□ -0.92
TRAF1-202ENST00000540010 A0A1W2PQF6 199 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 OR2A25A4D2G3 310 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 CPNE6O95741 557 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 ARAFP10398 606 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 HNRNPA2B1P22626 353 aaKnown RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 RBM34P42696 430 aaKnown RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 ALKBH2Q6NS38 261 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 VRK2Q86Y07 508 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 THAP4Q8WY91 577 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 SLC25A18Q9H1K4 315 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 CHMP1AQ9HD42 196 aaPredicted RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 PRDM9Q9NQV7 894 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 TEX10Q9NXF1 929 aaPredicted RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 SCP2D1Q9UJQ7 156 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 RHPN2P1A8MT19 583 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 HCRTR2O43614 444 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 PLXNA2O75051 1894 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 SCGNO76038 276 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 IGFBP1P08833 259 aaPredicted RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 PTPRZ1P23471 2315 aaPredicted RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 CBX5P45973 191 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 CTBP2P56545 445 aa9.32□□□□□ -0.92
TRAF1-202ENST00000540010 RPS25P62851 125 aaKnown RBP9.32□□□□□ -0.92
TRAF1-202ENST00000540010 SNTA1Q13424 505 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms