RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CDK10Q15131 360 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 ZNF324BQ6AW86 544 aaPredicted RBP6.95□□□□□ -1.3
GNE-205ENST00000539815 DENND5AQ6IQ26 1287 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 SLC22A25Q6T423 547 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 MICU2Q8IYU8 434 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 C16orf52Q8NHV5 167 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.95□□□□□ -1.36e-7■■■■■ 36.5
GNE-205ENST00000539815 NEIL2Q969S2 332 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 ISOC1Q96CN7 298 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 PTCD3Q96EY7 689 aaKnown RBP6.95□□□□□ -1.3
GNE-205ENST00000539815 CLPTM1LQ96KA5 538 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 VRK1Q99986 396 aaPredicted RBP6.95□□□□□ -1.3
GNE-205ENST00000539815 BCL7BQ9BQE9 202 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 MESP1Q9BRJ9 268 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 OR51B5Q9H339 312 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 RPRD1BQ9NQG5 326 aaKnown RBP6.95□□□□□ -1.3
GNE-205ENST00000539815 NECTIN3Q9NQS3 549 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 FKBP7Q9Y680 259 aa6.95□□□□□ -1.3
GNE-205ENST00000539815 ANKRD36A6QL64 1941 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 MROH6A6NGR9 719 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 CBR3O75828 277 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 COX5BP10606 129 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PTX3P26022 381 aaPredicted RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 SLC1A2P43004 574 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 CAPZA1P52907 286 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 RAB14P61106 215 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 SORDQ00796 357 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ACSM2AQ08AH3 577 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 GPR68Q15743 365 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ACSM2BQ68CK6 577 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 LARP4Q71RC2 724 aaKnown RBP eCLIP6.94□□□□□ -1.3
GNE-205ENST00000539815 ZNF619Q8N2I2 560 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PYDC1Q8WXC3 89 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 GNRHR2Q96P88 292 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 BARD1Q99728 777 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 DYNLRB1Q9NP97 96 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 TNPO3Q9Y5L0 923 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 RNF223E7ERA6 249 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 SSX4O60224 188 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 NRP2O60462 931 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 MLNP12872 115 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ZNF250P15622 560 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 TYK2P29597 1187 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 RNF144AP50876 292 aaPredicted RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 GDF10P55107 478 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 CDH15P55291 814 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 CARD18P57730 90 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 YBX1P67809 324 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 PDIA2Q13087 525 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 ALKBH1Q13686 389 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 VPS26BQ4G0F5 336 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 SLX4IPQ5VYV7 408 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ZNF534Q76KX8 674 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ZNF550Q7Z398 422 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 VN1R4Q7Z5H5 301 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ACOT4Q8N9L9 421 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ELP5Q8TE02 316 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 CERS2Q96G23 380 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 BTBD10Q9BSF8 475 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 CHID1Q9BWS9 393 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 LIME1Q9H400 295 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 FKRPQ9H9S5 495 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 NMRAL1Q9HBL8 299 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 Q9N2J8 555 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 GIMAP2Q9UG22 337 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 RPS6KA6Q9UK32 745 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PPIEQ9UNP9 301 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 ZNF835Q9Y2P0 537 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 KCNE1BA0A087WTH5 132 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 TLX2O43763 284 aaPredicted RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 TNFAIP8O95379 198 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 GPR75O95800 540 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PROCP04070 461 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 FABP1P07148 127 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PTPN7P35236 360 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PIK3CBP42338 1070 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 PRKAG1P54619 331 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 MAPK11Q15759 364 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 Q5BKY6 102 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 TIGD3Q6B0B8 471 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 TMEM65Q6PI78 240 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 KLHL17Q6TDP4 642 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ANKFN1Q8N957 763 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 SLC35B2Q8TB61 432 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 MTERF1Q99551 399 aaKnown RBP6.94□□□□□ -1.3
GNE-205ENST00000539815 SERPINI1Q99574 410 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 FOLH1BQ9HBA9 442 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 SERINC1Q9NRX5 453 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ADAMTS6Q9UKP5 1117 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 ACOT9Q9Y305 439 aa6.94□□□□□ -1.3
GNE-205ENST00000539815 DBX1A6NMT0 343 aa6.93□□□□□ -1.3
GNE-205ENST00000539815 EIF1AYO14602 144 aaKnown RBP6.93□□□□□ -1.3
GNE-205ENST00000539815 LDLRAD4O15165 306 aa6.93□□□□□ -1.3
GNE-205ENST00000539815 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
GNE-205ENST00000539815 LCMT2O60294 686 aaKnown RBP6.93□□□□□ -1.3
GNE-205ENST00000539815 ONECUT2O95948 504 aa6.93□□□□□ -1.3
GNE-205ENST00000539815 INHBAP08476 426 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms