RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CCM2LQ9NUG4 571 aaPredicted RBP11.81□□□□□ -0.52
CCDC42-202ENST00000539522 DCAF13Q9NV06 445 aaKnown RBP11.81□□□□□ -0.52
CCDC42-202ENST00000539522 CARD8Q9Y2G2 431 aa11.81□□□□□ -0.52
CCDC42-202ENST00000539522 AP4S1Q9Y587 144 aa11.81□□□□□ -0.52
CCDC42-202ENST00000539522 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
CCDC42-202ENST00000539522 KIAA1549Q9HCM3 1950 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 A0A0G2JPF8 293 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TCRBV5S2A0A599 114 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TTLL8A6PVC2 850 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 HNRNPCL2B2RXH8 293 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 HNRNPCL3B7ZW38 293 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 SHISA8B8ZZ34 492 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 GMFGO60234 142 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 MFN2O95140 757 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 BAG2O95816 211 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 IFNA14P01570 189 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 IGHG3P01860 377 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 HPNP05981 417 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 HNRNPCL4P0DMR1 293 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 ANPEPP15144 967 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 ZNF24P17028 368 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 PSMA4P25789 261 aaKnown RBP11.8□□□□□ -0.52
CCDC42-202ENST00000539522 KDELR2P33947 212 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 ERFP50548 548 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 CRISP3P54108 245 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 RPP38P78345 283 aaKnown RBP11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TLE1Q04724 770 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 SLC34A1Q06495 639 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 ELOAQ14241 798 aaKnown RBP11.8□□□□□ -0.52
CCDC42-202ENST00000539522 GNA13Q14344 377 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 RCN1Q15293 331 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 IGFBP7Q16270 282 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TMEM44Q2T9K0 475 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 EIPR1Q53HC9 387 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 REEP3Q6NUK4 255 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 CCDC80Q76M96 950 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TRILQ7L0X0 811 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 PACS2Q86VP3 889 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 OR1J4Q8NGS1 313 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 POC1BQ8TC44 478 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TAMM41Q96BW9 452 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 SH3YL1Q96HL8 342 aaPredicted RBP11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TBL1XR1Q9BZK7 514 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 HOXD1Q9GZZ0 328 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 DEFB127Q9H1M4 99 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 OLAHQ9NV23 265 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 ARMC1Q9NVT9 282 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 DNAJB12Q9NXW2 375 aaKnown RBP11.8□□□□□ -0.52
CCDC42-202ENST00000539522 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
CCDC42-202ENST00000539522 RPS6KA6Q9UK32 745 aa11.8□□□□□ -0.52
CCDC42-202ENST00000539522 TENM4Q6N022 2769 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 DHRS12A0PJE2 317 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 CDHR4A6H8M9 788 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 C5orf58C9J3I9 102 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 NPIPA5E9PKD4 350 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 H0Y3Z8 333 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 SCDO00767 359 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 AP3D1O14617 1153 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 HNRNPRO43390 633 aaKnown RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 NDUFB5O43674 189 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 EFNA2O43921 213 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 TPST2O60704 377 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 OPN1SWP03999 348 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 PABPC4LP0CB38 370 aaKnown RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 PRG2P13727 222 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 NID1P14543 1247 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 CD247P20963 164 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 GCKP35557 465 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 KCNJ10P78508 379 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 HPCAP84074 193 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 ALDH6A1Q02252 535 aaKnown RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 C17orf67Q0P5P2 114 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 DUSP7Q16829 419 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 DCST1Q5T197 706 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 MRPL2Q5T653 305 aaKnown RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 FAM109AQ8N4B1 249 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 PAPD5Q8NDF8 572 aaKnown RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 FAM83FQ8NEG4 500 aaPredicted RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 OR4D11Q8NGI4 311 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 BBS10Q8TAM1 723 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 PHOSPHO1Q8TCT1 267 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 CANT1Q8WVQ1 401 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 C1GALT1C1Q96EU7 318 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 GPR137Q96N19 417 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 OR2B2Q9GZK3 357 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 SLC6A15Q9H2J7 730 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 CALML5Q9NZT1 146 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 PPP4R1LQ9P1A2 415 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 TNFRSF10DQ9UBN6 386 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 BOKQ9UMX3 212 aaPredicted RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 NPIPA1Q9UND3 350 aa11.79□□□□□ -0.52
CCDC42-202ENST00000539522 ZNF443Q9Y2A4 671 aaPredicted RBP11.79□□□□□ -0.52
CCDC42-202ENST00000539522 A0A1B0GVC2 190 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 H3BNX3 289 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 PYCARD-AS1I3L0S3 204 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 FRS3O43559 492 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 CBR3O75828 277 aa11.78□□□□□ -0.52
CCDC42-202ENST00000539522 PDE9AO76083 593 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms